RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 GALTP07902 379 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 CALCRLQ16602 461 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 ATAT1Q5SQI0 421 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 NOTUMQ6P988 496 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 MRPL10Q7Z7H8 261 aaKnown RBP16.44■□□□□ 0.22
HDAC6-204ENST00000376643 POTEDQ86YR6 584 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 KSR1Q8IVT5 923 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 TPH2Q8IWU9 490 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 UBALD2Q8IYN6 164 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 PLCD3Q8N3E9 789 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 HAS1Q92839 578 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 TMEM143Q96AN5 459 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 FBXL18Q96ME1 805 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 NRDE2Q9H7Z3 1164 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 ANKEF1Q9NU02 776 aa16.44■□□□□ 0.22
HDAC6-204ENST00000376643 PIEZO1Q92508 2521 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 NT5C1B-RDH14C9J2C7 533 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 NEMFO60524 1076 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 NCLP19338 710 aaKnown RBP16.43■□□□□ 0.22
HDAC6-204ENST00000376643 NUBP1P53384 320 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 AK2P54819 239 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 PTPN5P54829 565 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 RBM10P98175 930 aaKnown RBP16.43■□□□□ 0.22
HDAC6-204ENST00000376643 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 SAFBQ15424 915 aaKnown RBP eCLIP16.43■□□□□ 0.22
HDAC6-204ENST00000376643 CABP7Q86V35 215 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 FBXL6Q8N531 539 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 LPPQ93052 612 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 GTF3C6Q969F1 213 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 DYDC2Q96IM9 177 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 GBP3Q9H0R5 595 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 SFXN1Q9H9B4 322 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 USTQ9Y2C2 406 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 FAN1Q9Y2M0 1017 aa16.43■□□□□ 0.22
HDAC6-204ENST00000376643 XRCC6P12956 609 aaKnown RBP eCLIP16.42■□□□□ 0.22
HDAC6-204ENST00000376643 ITGA4P13612 1032 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 NHLH1Q02575 133 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 CYP4A11Q02928 519 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 SPIRE1Q08AE8 756 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 CTTNQ14247 550 aaKnown RBP16.42■□□□□ 0.22
HDAC6-204ENST00000376643 KIAA1841Q6NSI8 718 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 IFNLR1Q8IU57 520 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-204ENST00000376643 TDRD5Q8NAT2 981 aaKnown RBP16.42■□□□□ 0.22
HDAC6-204ENST00000376643 OXER1Q8TDS5 423 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 EIF2AK1Q9BQI3 630 aaKnown RBP16.42■□□□□ 0.22
HDAC6-204ENST00000376643 NFKBIZQ9BYH8 718 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 TRIM6Q9C030 488 aaPredicted RBP16.42■□□□□ 0.22
HDAC6-204ENST00000376643 TSHZ2Q9NRE2 1034 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 MRPL17Q9NRX2 175 aaKnown RBP16.42■□□□□ 0.22
HDAC6-204ENST00000376643 PPP4R2Q9NY27 417 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 RGL1Q9NZL6 768 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 SORCS3Q9UPU3 1222 aa16.42■□□□□ 0.22
HDAC6-204ENST00000376643 ZMYM2Q9UBW7 1377 aa16.41■□□□□ 0.22
HDAC6-204ENST00000376643 INO80B-WBP1J3KQ70 363 aa16.41■□□□□ 0.22
HDAC6-204ENST00000376643 URODP06132 367 aa16.41■□□□□ 0.22
HDAC6-204ENST00000376643 SLC11A1P49279 550 aa16.41■□□□□ 0.22
HDAC6-204ENST00000376643 PTENP60484 403 aa16.41■□□□□ 0.22
HDAC6-204ENST00000376643 ORC2Q13416 577 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-204ENST00000376643 AGMOQ6ZNB7 445 aa16.41■□□□□ 0.22
HDAC6-204ENST00000376643 ACSF2Q96CM8 615 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-204ENST00000376643 APOL5Q9BWW9 433 aa16.41■□□□□ 0.22
HDAC6-204ENST00000376643 TTC12Q9H892 705 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-204ENST00000376643 WRAP73Q9P2S5 460 aaPredicted RBP16.41■□□□□ 0.22
HDAC6-204ENST00000376643 DBR1Q9UK59 544 aaKnown RBP16.41■□□□□ 0.22
HDAC6-204ENST00000376643 INPPL1O15357 1258 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 SLITRK3O94933 977 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 CTDNEP1O95476 244 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 KLRC2P26717 231 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 HOXA11P31270 313 aaPredicted RBP16.4■□□□□ 0.22
HDAC6-204ENST00000376643 NR5A1Q13285 461 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 PTPN14Q15678 1187 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 LONRF3Q496Y0 759 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 RARS2Q5T160 578 aaKnown RBP16.4■□□□□ 0.22
HDAC6-204ENST00000376643 CYP26C1Q6V0L0 522 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 DIS3L2Q8IYB7 885 aaKnown RBP16.4■□□□□ 0.22
HDAC6-204ENST00000376643 ZDHHC14Q8IZN3 488 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 MCPH1Q8NEM0 835 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 ERMNQ8TAM6 284 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 TNFRSF25Q93038 417 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 HSD17B14Q9BPX1 270 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 CSRNP2Q9H175 543 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 GIT1Q9Y2X7 761 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 TECTAO75443 2155 aa16.4■□□□□ 0.22
HDAC6-204ENST00000376643 C1RP00736 705 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 SOD2P04179 222 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 ADH1AP07327 375 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 CREMQ03060 361 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 ME3Q16798 604 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 C15orf39Q6ZRI6 1047 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 CCDC149Q6ZUS6 474 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 TMEM173Q86WV6 379 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-204ENST00000376643 ZNF579Q8NAF0 562 aaKnown RBP16.39■□□□□ 0.21
HDAC6-204ENST00000376643 NSUN7Q8NE18 718 aaKnown RBP16.39■□□□□ 0.21
HDAC6-204ENST00000376643 PRIMPOLQ96LW4 560 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 POMKQ9H5K3 350 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 MINDY3Q9H8M7 445 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 BMP2KQ9NSY1 1161 aaPredicted RBP16.39■□□□□ 0.21
HDAC6-204ENST00000376643 DNAJB4Q9UDY4 337 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 IPPQ9Y573 584 aa16.39■□□□□ 0.21
HDAC6-204ENST00000376643 TSPAN1O60635 241 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms