RNA–Protein interactions for RNA: ENST00000375759.7

SPEN-201, Transcript of spen family transcriptional repressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPEN, Length 12,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-201ENST00000375759 SPATA4Q8NEY3 305 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 HEMGNQ9BXL5 484 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 AURKCQ9UQB9 309 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 PJA2O43164 708 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 RCAN1P53805 252 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 POU5F1BQ06416 359 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 RUBCNLQ9H714 662 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 EDEM3Q9BZQ6 932 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 C10orf88Q9H8K7 445 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 ABCF3Q9NUQ8 709 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 PI4KBQ9UBF8 816 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 FBXL5Q9UKA1 691 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 ANGPT2O15123 496 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 UBXN2AP68543 259 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 ZSCAN9O15535 394 aaPredicted RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 KRT14P02533 472 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 KCNA3P22001 575 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 FOXD4Q12950 439 aaPredicted RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 FAM160B2Q86V87 743 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 DHX40Q8IX18 779 aaKnown RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 PLEKHF1Q96S99 279 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 CCT8L2Q96SF2 557 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 SFMBT1Q9UHJ3 866 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 USP15Q9Y4E8 981 aaPredicted RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 AP3B1O00203 1094 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 TYK2P29597 1187 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 HADHAP40939 763 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 DMC1Q14565 340 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 TMEM270Q6UE05 265 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 LRIG3Q6UXM1 1119 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 SULF1Q8IWU6 871 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 MRPL1Q9BYD6 325 aaKnown RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 SLC9A2Q9UBY0 812 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 ZNF608Q9ULD9 1512 aaPredicted RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 CLDN3O15551 220 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 HSPA1AP0DMV8 641 aaKnown RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 HSPA1BP0DMV9 641 aaKnown RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 TNFAIP2Q03169 654 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 C16orf89Q6UX73 402 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 CMTM5Q96DZ9 223 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 MXD4Q14582 209 aaPredicted RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 DCPSQ96C86 337 aaKnown RBP10.42□□□□□ -0.74
SPEN-201ENST00000375759 AATKQ6ZMQ8 1374 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 PITPNM2Q9BZ72 1349 aa10.42□□□□□ -0.74
SPEN-201ENST00000375759 PEX3P56589 373 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 LRRC31Q6UY01 552 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 CXorf56Q9H5V9 222 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 MPP6Q9NZW5 540 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 HDAC6Q9UBN7 1215 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 LRFN2Q9ULH4 789 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 CYTH1Q15438 398 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 FMR1NBQ8N0W7 255 aaPredicted RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 MMTAG2Q9BU76 263 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 PUS7LQ9H0K6 701 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 PRR23D1E9PI22 279 aaPredicted RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 PRR23D2P0DMB1 279 aaPredicted RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 KNOP1Q1ED39 458 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 DEPDC1Q5TB30 811 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 CDKL3Q8IVW4 592 aaPredicted RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 RFFLQ8WZ73 363 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 DDX17Q92841 729 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 IL17RAQ96F46 866 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 DDX47Q9H0S4 455 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 ATP6V0A4Q9HBG4 840 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 BFARQ9NZS9 450 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 TSC22D4Q9Y3Q8 395 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 OSBPP22059 807 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 SLC16A2P36021 539 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 OSTNP61366 133 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 CCDC134Q9H6E4 229 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 ZCCHC17Q9NP64 241 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 PVALEFA0A1B0GWK0 134 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 MRPS35P82673 323 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 NCAPHQ15003 741 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 CNKSR1Q969H4 720 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 TRIM54Q9BYV2 358 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 PTCH1Q13635 1447 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 GSNP06396 782 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 RBBP7Q16576 425 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 LCORLQ8N3X6 602 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 FASTKD1Q53R41 847 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 PASD1Q8IV76 773 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 THEM5Q8N1Q8 247 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 NLRP4Q96MN2 994 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 PARVAQ9NVD7 372 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 CROCC2H7BZ55 1655 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 ESYT3A0FGR9 886 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 SUPT3HO75486 399 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 FTLP02792 175 aaPredicted RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 KRT72Q14CN4 511 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 OR6B3Q8NGW1 331 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 TSSK1BQ9BXA7 367 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 LRRC14Q15048 493 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 RRM2BQ7LG56 351 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 DDIASQ8IXT1 998 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 ZNF473Q8WTR7 871 aaKnown RBP10.41□□□□□ -0.74
SPEN-201ENST00000375759 EME1Q96AY2 570 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 LOC102724159A0A0B4J2E5 919 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 CDH16O75309 829 aa10.41□□□□□ -0.74
SPEN-201ENST00000375759 PWP2Q15269 919 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms