RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 HERC4Q5GLZ8 1057 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-201ENST00000374673 TAS1R3Q7RTX0 852 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 HAUS6Q7Z4H7 955 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 TDHQ8IZJ6 230 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 LINC01599Q8WXQ3 324 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 TSPYL2Q9H2G4 693 aaPredicted RBP16.54■□□□□ 0.24
HSPG2-201ENST00000374673 RGS18Q9NS28 235 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 DACT1Q9NYF0 836 aa16.54■□□□□ 0.24
HSPG2-201ENST00000374673 TTC3P53804 2025 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 CNTNAP2Q9UHC6 1331 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 A0A1W2PPC1 479 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 DENND3A2RUS2 1198 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 ACKR2O00590 384 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 ENPP3O14638 875 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 KLRC4O43908 158 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 HOXA11P31270 313 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-201ENST00000374673 DPYDQ12882 1025 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 POSTNQ15063 836 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 ZNF720Q7Z2F6 126 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 RTN4RL1Q86UN2 441 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-201ENST00000374673 RNPC3Q96LT9 517 aaKnown RBP16.53■□□□□ 0.24
HSPG2-201ENST00000374673 ADAM2Q99965 735 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 C1orf112Q9NSG2 853 aa16.53■□□□□ 0.24
HSPG2-201ENST00000374673 CXXC1Q9P0U4 656 aaPredicted RBP16.53■□□□□ 0.24
HSPG2-201ENST00000374673 PIN4Q9Y237 131 aaKnown RBP16.53■□□□□ 0.24
HSPG2-201ENST00000374673 CEP290O15078 2479 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 ZBBXA8MT70 800 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 B4GALT5O43286 388 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 PPP1R37O75864 691 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 EDN1P05305 212 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 ARF4P18085 180 aaPredicted RBP16.52■□□□□ 0.24
HSPG2-201ENST00000374673 NMT1P30419 496 aaKnown RBP16.52■□□□□ 0.24
HSPG2-201ENST00000374673 KCNJ6P48051 423 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 GTF2BQ00403 316 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 NCBP1Q09161 790 aaKnown RBP16.52■□□□□ 0.24
HSPG2-201ENST00000374673 PRPF4BQ13523 1007 aaKnown RBP16.52■□□□□ 0.24
HSPG2-201ENST00000374673 ALCAMQ13740 583 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 NOTUMQ6P988 496 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 LIN28BQ6ZN17 250 aaKnown RBP eCLIP16.52■□□□□ 0.241e-6■□□□□ 9
HSPG2-201ENST00000374673 HVCN1Q96D96 273 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 CCDC51Q96ER9 411 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 TRAIPQ9BWF2 469 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 STRA6Q9BX79 667 aa16.52■□□□□ 0.24
HSPG2-201ENST00000374673 MRPL44Q9H9J2 332 aaKnown RBP16.52■□□□□ 0.24
HSPG2-201ENST00000374673 HOOK1Q9UJC3 728 aaKnown RBP16.52■□□□□ 0.24
HSPG2-201ENST00000374673 A0A1B0GUA9 196 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 C9IYK1 514 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 AMHP03971 560 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 RPN1P04843 607 aaKnown RBP16.51■□□□□ 0.23
HSPG2-201ENST00000374673 STRN3Q13033 797 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 KMT5BQ4FZB7 885 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 FAM26FQ5R3K3 315 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 SLC24A5Q71RS6 500 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 PHOSPHO2Q8TCD6 241 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 CPB2Q96IY4 423 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 SLC9A7Q96T83 725 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 MRPL4Q9BYD3 311 aaKnown RBP16.51■□□□□ 0.23
HSPG2-201ENST00000374673 TBC1D7Q9P0N9 293 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 TBX20Q9UMR3 447 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 COLQQ9Y215 455 aaPredicted RBP16.51■□□□□ 0.23
HSPG2-201ENST00000374673 SLC4A7Q9Y6M7 1214 aa16.51■□□□□ 0.23
HSPG2-201ENST00000374673 GBF1Q92538 1859 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 TTLL13PA6NNM8 815 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 N4BP3O15049 544 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 GCNT3O95395 438 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 MCM4P33991 863 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 SARSP49591 514 aaKnown RBP16.5■□□□□ 0.23
HSPG2-201ENST00000374673 RAB27AP51159 221 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 DEFB103AP81534 67 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 PSMD2Q13200 908 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 PNOCQ13519 176 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 KCNB1Q14721 858 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 ZC2HC1CQ53FD0 456 aaPredicted RBP16.5■□□□□ 0.23
HSPG2-201ENST00000374673 NT5DC1Q5TFE4 455 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 TWF2Q6IBS0 349 aaKnown RBP16.5■□□□□ 0.23
HSPG2-201ENST00000374673 MAP4K3Q8IVH8 894 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 CCDC47Q96A33 483 aaKnown RBP16.5■□□□□ 0.23
HSPG2-201ENST00000374673 FGFBP2Q9BYJ0 223 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 EXOC1Q9NV70 894 aa16.5■□□□□ 0.23
HSPG2-201ENST00000374673 A0A0U1RQF3 1178 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 RHOBTB3O94955 611 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 PIGRP01833 764 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 MYBP10242 640 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 SKIP12755 728 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 CASP5P51878 434 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 FAM189BP81408 668 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 UBXN11Q5T124 520 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 ATF7IP2Q5U623 682 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 SLC27A1Q6PCB7 646 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 ZPBP2Q6X784 338 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 STXBP4Q6ZWJ1 553 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 MYOCDQ8IZQ8 938 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 CRIPAKQ8N1N5 446 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 SPATA20Q8TB22 786 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 HPS3Q969F9 1004 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 TOP1MTQ969P6 601 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 ACO2Q99798 780 aaKnown RBP16.49■□□□□ 0.23
HSPG2-201ENST00000374673 PDZD7Q9H5P4 517 aa16.49■□□□□ 0.23
HSPG2-201ENST00000374673 ELAC1Q9H777 363 aaKnown RBP16.49■□□□□ 0.23
HSPG2-201ENST00000374673 FAM105AQ9NUU6 356 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms