RNA–Protein interactions for RNA: ENST00000374541.3

PTPN3-202, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPN3, Length 6,703 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-202ENST00000374541 CRHR2Q13324 411 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 MTMR1Q13613 665 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 GPBP1Q86WP2 473 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 MTBPQ96DY7 904 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 DHTKD1Q96HY7 919 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ASCC2Q9H1I8 757 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ZNF302Q9NR11 478 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TTLL3Q9Y4R7 772 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TMEM247A6NEH6 219 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 GOLGA8MH3BSY2 632 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 MYO1FO00160 1098 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 FOXN1O15353 648 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 DDAH1O94760 285 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 MT-ND3P03897 115 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 CDC42EP1Q00587 391 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 LAMC2Q13753 1193 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 C6orf118Q5T5N4 469 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 DYMQ7RTS9 669 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 DEFB123Q8N688 67 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 ZBTB18Q99592 522 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 GPR182O15218 404 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 XYLBO75191 536 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 NDUFS2O75306 463 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 NTSR2O95665 410 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 POLE2P56282 527 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 HDLBPQ00341 1268 aaKnown RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 FSCBQ5H9T9 825 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 PIP4K2CQ8TBX8 421 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 AFG1LQ8WV93 481 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TRAIPQ9BWF2 469 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 TRIM45Q9H8W5 580 aaPredicted RBP6.72□□□□□ -1.33
PTPN3-202ENST00000374541 SLC13A4Q9UKG4 626 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 MAPK8IP1Q9UQF2 711 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 SNX5Q9Y5X3 404 aa6.72□□□□□ -1.33
PTPN3-202ENST00000374541 RSPH10B2B2RC85 870 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 ZC3H11AO75152 810 aaKnown RBP eCLIP6.71□□□□□ -1.33
PTPN3-202ENST00000374541 GGPS1O95749 300 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 RSPH10BP0C881 870 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 EEF1B2P24534 225 aaKnown RBP6.71□□□□□ -1.33
PTPN3-202ENST00000374541 MAP3K10Q02779 954 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 ART3Q13508 389 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 RCN2Q14257 317 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 ANKRD36BP1Q96IX9 119 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 ARHGAP26Q9UNA1 814 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 PTCH2Q9Y6C5 1203 aa6.71□□□□□ -1.33
PTPN3-202ENST00000374541 RPLP2P05387 115 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 OR52Z1P0C646 297 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ADKP55263 362 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 MYL7Q01449 175 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 RHPN2Q8IUC4 686 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ZNF34Q8IZ26 560 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 MRPL47Q9HD33 250 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 SUCLA2Q9P2R7 463 aaPredicted RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ZNF212Q9UDV6 495 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 F5H6K3 240 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 H7C0C1 242 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 PER1O15534 1290 aaPredicted RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 PFKFB2O60825 505 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 HEXIM1O94992 359 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 PGK1P00558 417 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 CHGBP05060 677 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ESRRAP11474 423 aaPredicted RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ABCB4P21439 1286 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 MAGEA9P43362 315 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ATP5OP48047 213 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 KLRC3Q07444 240 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 AK8Q96MA6 479 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 NT5C1BQ96P26 610 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 EPC1Q9H2F5 836 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ST7Q9NRC1 585 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 GIMAP4Q9NUV9 329 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 MRPS17Q9Y2R5 130 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 CCDC188H7C350 402 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 MCF2LO15068 1137 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 CIITAP33076 1130 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 PSMD7P51665 324 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 COPB1P53618 953 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 PRKCZQ05513 592 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 FSCN1Q16658 493 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ACCSLQ4AC99 568 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 RCSD1Q6JBY9 416 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 NEK8Q86SG6 692 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 USP6NLQ92738 828 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 FGD4Q96M96 766 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 NUDCD1Q96RS6 583 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 RGS17Q9UGC6 210 aaPredicted RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 NVLO15381 856 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 IL1RL1Q01638 556 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 PNOCQ13519 176 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 KLC3Q6P597 504 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 HOMEZQ8IX15 550 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 BLIDQ8IZY5 108 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 CATSPER1Q8NEC5 780 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ATOH1Q92858 354 aaPredicted RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 ATP6V1E2Q96A05 226 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 SMARCAD1Q9H4L7 1026 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 SUN2Q9UH99 717 aa6.71□□□□□ -1.34
PTPN3-202ENST00000374541 LSM7Q9UK45 103 aaKnown RBP6.71□□□□□ -1.34
PTPN3-202ENST00000374541 IRF6O14896 467 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms