RNA–Protein interactions for RNA: ENST00000373386.6

GARNL3-201, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 3,143 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-201ENST00000373386 TXNRD1Q16881 649 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 NXNQ6DKJ4 435 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 SLC2A7Q6PXP3 512 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 UNC5DQ6UXZ4 953 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 CCNI2Q6ZMN8 369 aaPredicted RBP8.84□□□□□ -0.99
GARNL3-201ENST00000373386 REXO1Q8N1G1 1221 aaKnown RBP8.84□□□□□ -0.99
GARNL3-201ENST00000373386 ARHGAP18Q8N392 663 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 CSGALNACT2Q8N6G5 542 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 CAPZA3Q96KX2 299 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 TYW1Q9NV66 732 aaKnown RBP8.84□□□□□ -0.99
GARNL3-201ENST00000373386 RGS17Q9UGC6 210 aaPredicted RBP8.84□□□□□ -0.99
GARNL3-201ENST00000373386 FAM184BQ9ULE4 1060 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 SATB2Q9UPW6 733 aa8.84□□□□□ -0.99
GARNL3-201ENST00000373386 ATP8B3O60423 1300 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MGRN1O60291 552 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 ONECUT3O60422 494 aaPredicted RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 SRGAP2O75044 1071 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 IDEP14735 1019 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 RFC4P35249 363 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 CLK2P49760 499 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 PMS1P54277 932 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 TUBA4AP68366 448 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 KIF5AQ12840 1032 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 TMEM266Q2M3C6 531 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 TMEM119Q4V9L6 283 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 SLC44A4Q53GD3 710 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MIIPQ5JXC2 388 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 ZNF449Q6P9G9 518 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 SV2BQ7L1I2 683 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 SNX32Q86XE0 403 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 SYN2Q92777 582 aaPredicted RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 TBC1D20Q96BZ9 403 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MTMR8Q96EF0 704 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 SPACA7Q96KW9 195 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 NHEJ1Q9H9Q4 299 aaPredicted RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 ATAD3AQ9NVI7 634 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 GGA1Q9UJY5 639 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 FBXL5Q9UKA1 691 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 BRWD3Q6RI45 1802 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 CCNT1O60563 726 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 KCNJ13O60928 360 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 STAMBPO95630 424 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 UBL4AP11441 157 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 GGCXP38435 758 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 CENPAP49450 140 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 VAV2P52735 878 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 KLC1Q07866 573 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 NFIXQ14938 502 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 NLRP9Q7RTR0 991 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MMGT1Q8N4V1 131 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 NSMCE1Q8WV22 266 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 TCF12Q99081 682 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 SEMA4AQ9H3S1 761 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 PLAGL2Q9UPG8 496 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 GTPBP10A4D1E9 387 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 USO1O60763 962 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 NPTXRO95502 500 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 PDHBP11177 359 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 ATP5DP30049 168 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MARSP56192 900 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 GPSM2P81274 684 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 PDE4DQ08499 809 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 PAK2Q13177 524 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MSLNQ13421 630 aaPredicted RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 TOMM20Q15388 145 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 SPA17Q15506 151 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MAPRE1Q15691 268 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 BBS9Q3SYG4 887 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 PCNX4Q63HM2 1172 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 PRR5LQ6MZQ0 368 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 NEPROQ6NW34 567 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MOXD1Q6UVY6 613 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 MAATS1Q7Z4T9 603 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 OSTM1Q86WC4 334 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 GALNT6Q8NCL4 622 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 AENQ8WTP8 325 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 CNOT6LQ96LI5 555 aaKnown RBP8.83□□□□□ -1
GARNL3-201ENST00000373386 MTMR4Q9NYA4 1195 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 STX8Q9UNK0 236 aa8.83□□□□□ -1
GARNL3-201ENST00000373386 KDM3AQ9Y4C1 1321 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 GOLGA8KD6RF30 607 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 PJA2O43164 708 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 BUB1BO60566 1050 aaPredicted RBP8.82□□□□□ -1
GARNL3-201ENST00000373386 DNAJC8O75937 253 aaPredicted RBP8.82□□□□□ -1
GARNL3-201ENST00000373386 MXRA7P84157 204 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 DR1Q01658 176 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 GPATCH4Q5T3I0 446 aaKnown RBP8.82□□□□□ -1
GARNL3-201ENST00000373386 ANKRD40Q6AI12 368 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 PDXDC1Q6P996 788 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 ZNF554Q86TJ5 538 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 ZC3H3Q8IXZ2 948 aaKnown RBP8.82□□□□□ -1
GARNL3-201ENST00000373386 RASGRP4Q8TDF6 673 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 LRRC15Q8TF66 581 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 MAML1Q92585 1016 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 MRIQ9BWK5 157 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 EHD4Q9H223 541 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 SLC40A1Q9NP59 571 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 C2CD2Q9Y426 696 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 A0A0G2JS52 829 aa8.82□□□□□ -1
GARNL3-201ENST00000373386 A6NNZ2 444 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms