RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 ANXA13P27216 316 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 SLC39A4Q6P5W5 647 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 CCDC62Q6P9F0 684 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 FMNL3Q8IVF7 1028 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 UBXN4Q92575 508 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 RRAGCQ9HB90 399 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 DNAJC12Q9UKB3 198 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 FERP16591 822 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 PTK2Q05397 1052 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 PPP3CAQ08209 521 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 TTLL4Q14679 1199 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 ERCC6LQ2NKX8 1250 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 HSDL1Q3SXM5 330 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 TAS1R3Q7RTX0 852 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 CBWD2Q8IUF1 395 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 ASAP3Q8TDY4 903 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 GLG1Q92896 1179 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 SAAL1Q96ER3 474 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 ADAMTS1Q9UHI8 967 aa27.17■■□□□ 1.94
CTSA-203ENST00000372459 PMM2O15305 246 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 LGR5O75473 907 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 ADRB2P07550 413 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 ZSCAN20P17040 1043 aaPredicted RBP27.16■■□□□ 1.94
CTSA-203ENST00000372459 GLRA2P23416 452 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 STRN3Q13033 797 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 C1orf220Q5T0J3 134 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 CEP112Q8N8E3 955 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 TRIM58Q8NG06 486 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 LMO3Q8TAP4 145 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 DEPTORQ8TB45 409 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 BBXQ8WY36 941 aaPredicted RBP27.16■■□□□ 1.94
CTSA-203ENST00000372459 FBXL18Q96ME1 805 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 SPATA33Q96N06 139 aa27.16■■□□□ 1.94
CTSA-203ENST00000372459 TACC1O75410 805 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 CELF2O95319 508 aaKnown RBP27.15■■□□□ 1.94
CTSA-203ENST00000372459 TXNP10599 105 aaKnown RBP27.15■■□□□ 1.94
CTSA-203ENST00000372459 GCLMP48507 274 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 PLPPR4Q7Z2D5 763 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 ZNF571Q7Z3V5 609 aaPredicted RBP27.15■■□□□ 1.94
CTSA-203ENST00000372459 PLEKHO2Q8TD55 490 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 MORF4L1Q9UBU8 362 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 MCM3APO60318 1980 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 A0A087X0T9 212 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 ANO9A1A5B4 782 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 F8VZ95 297 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 FAM228BP0C875 321 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 ZBTB48P10074 688 aaPredicted RBP27.15■■□□□ 1.94
CTSA-203ENST00000372459 AMPD2Q01433 879 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 ZNF792Q3KQV3 632 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 C10orf76Q5T2E6 689 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 ARMCX2Q7L311 632 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 USP37Q86T82 979 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 ABRAQ8N0Z2 381 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 SCFD2Q8WU76 684 aa27.15■■□□□ 1.94
CTSA-203ENST00000372459 LRRIQ4A6NIV6 560 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 MAFO75444 373 aaPredicted RBP27.14■■□□□ 1.94
CTSA-203ENST00000372459 ADORA2AP29274 412 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 SOX5P35711 763 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 LIG4P49917 911 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 MXI1P50539 228 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 DMTNQ08495 405 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 DRAP1Q14919 205 aaPredicted RBP27.14■■□□□ 1.94
CTSA-203ENST00000372459 WHAMMP3Q1A5X7 153 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 EPC2Q52LR7 807 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 SPRYD7Q5W111 196 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 VPS36Q86VN1 386 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 GPD1LQ8N335 351 aa27.14■■□□□ 1.94
CTSA-203ENST00000372459 STRNO43815 780 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 FBXO38Q6PIJ6 1188 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 ILDR2Q71H61 639 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 SRGAP1Q7Z6B7 1085 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 TMC2Q8TDI7 906 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 MFSD14AQ96MC6 490 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 ALS2CR12Q96Q35 445 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 IVNS1ABPQ9Y6Y0 642 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 PLXNB2O15031 1838 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 ENC1O14682 589 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 CCDC172P0C7W6 258 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 PAPD7Q5XG87 772 aaKnown RBP27.13■■□□□ 1.93
CTSA-203ENST00000372459 TRAPPC11Q7Z392 1133 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 EXOC8Q8IYI6 725 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 RNF10Q8N5U6 811 aaKnown RBP27.13■■□□□ 1.93
CTSA-203ENST00000372459 PARD3BQ8TEW8 1205 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 VTI1AQ96AJ9 217 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 TMEM117Q9H0C3 514 aa27.13■■□□□ 1.93
CTSA-203ENST00000372459 GFPT2O94808 682 aa27.12■■□□□ 1.93
CTSA-203ENST00000372459 ATP1A1P05023 1023 aaKnown RBP27.12■■□□□ 1.93
CTSA-203ENST00000372459 ENPEPQ07075 957 aa27.12■■□□□ 1.93
CTSA-203ENST00000372459 PHLDB3Q6NSJ2 640 aa27.12■■□□□ 1.93
CTSA-203ENST00000372459 ATP8B4Q8TF62 1192 aa27.12■■□□□ 1.93
CTSA-203ENST00000372459 PRDM10Q9NQV6 1147 aa27.12■■□□□ 1.93
CTSA-203ENST00000372459 PDGFCQ9NRA1 345 aa27.12■■□□□ 1.93
CTSA-203ENST00000372459 DIS3Q9Y2L1 958 aaKnown RBP27.12■■□□□ 1.93
CTSA-203ENST00000372459 K7ERI5 159 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 MARK3P27448 753 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 SLC26A2P50443 739 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 COPS5Q92905 334 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 CCDC127Q96BQ5 260 aa27.11■■□□□ 1.93
CTSA-203ENST00000372459 PARK7Q99497 189 aaKnown RBP27.11■■□□□ 1.93
CTSA-203ENST00000372459 KIAA1586Q9HCI6 787 aa27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms