RNA–Protein interactions for RNA: ENST00000370542.1

LMO4-201, Transcript of LIM domain only 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO4, Length 1,260 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-201ENST00000370542 ATP8B1O43520 1251 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 PFKFB2O60825 505 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 SLU7O95391 586 aaKnown RBP16.54■□□□□ 0.24
LMO4-201ENST00000370542 TPM1P09493 284 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 DARSP14868 501 aaKnown RBP16.54■□□□□ 0.24
LMO4-201ENST00000370542 PLCB3Q01970 1234 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 NONOQ15233 471 aaKnown RBP eCLIP16.54■□□□□ 0.24
LMO4-201ENST00000370542 PPP4R3AQ6IN85 833 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 TRMT1LQ7Z2T5 733 aaKnown RBP16.54■□□□□ 0.24
LMO4-201ENST00000370542 MIER3Q7Z3K6 550 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 KRT25Q7Z3Z0 450 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 ADGRD2Q7Z7M1 963 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 ZNF598Q86UK7 904 aaKnown RBP16.54■□□□□ 0.24
LMO4-201ENST00000370542 PPP2R3CQ969Q6 453 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 PBXIP1Q96AQ6 731 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 CASD1Q96PB1 797 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 TRAIPQ9BWF2 469 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 TMEM117Q9H0C3 514 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 AAASQ9NRG9 546 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 TYW1Q9NV66 732 aaKnown RBP16.54■□□□□ 0.24
LMO4-201ENST00000370542 CLEC1BQ9P126 229 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 AKT3Q9Y243 479 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 LZTS1Q9Y250 596 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 PCDHB12Q9Y5F1 795 aa16.54■□□□□ 0.24
LMO4-201ENST00000370542 A0A0U1RQF3 1178 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 TBKBP1A7MCY6 615 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 FSCN2O14926 492 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 LINC01565O15544 149 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 HOXA2O43364 376 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 CHMP2AO43633 222 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 CDKL5O76039 1030 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 TBC1D8BQ0IIM8 1120 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 COASYQ13057 564 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 PPP2R5CQ13362 524 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 DRP2Q13474 957 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 SMAD4Q13485 552 aaKnown RBP16.53■□□□□ 0.24
LMO4-201ENST00000370542 KCNC3Q14003 757 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 STX1AQ16623 288 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 PDE12Q6L8Q7 609 aaKnown RBP16.53■□□□□ 0.24
LMO4-201ENST00000370542 LRRC55Q6ZSA7 311 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 NYAP1Q6ZVC0 841 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 ECHDC2Q86YB7 292 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 COLGALT1Q8NBJ5 622 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 C16orf45Q96MC5 204 aaPredicted RBP16.53■□□□□ 0.24
LMO4-201ENST00000370542 FAM20AQ96MK3 541 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 PPP1R16BQ96T49 567 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 NAT10Q9H0A0 1025 aaKnown RBP16.53■□□□□ 0.24
LMO4-201ENST00000370542 IRF2BPLQ9H1B7 796 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 VAV3Q9UKW4 847 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 TPCN1Q9ULQ1 816 aa16.53■□□□□ 0.24
LMO4-201ENST00000370542 TMEM221A6NGB7 291 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 M0R296 226 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 SLC37A4O43826 429 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 MAFO75444 373 aaPredicted RBP16.52■□□□□ 0.24
LMO4-201ENST00000370542 FGF18O76093 207 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 CTDNEP1O95476 244 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 GLP2RO95838 553 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 EOMESO95936 686 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 FGFR1P11362 822 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 CDK11BP21127 795 aaKnown RBP16.52■□□□□ 0.24
LMO4-201ENST00000370542 STK3Q13188 491 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 INF2Q27J81 1249 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 TRIM67Q6ZTA4 783 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 RNF135Q8IUD6 432 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 LRRC8AQ8IWT6 810 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 SMRP1Q8NCR6 262 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 HCSTQ9UBK5 93 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 DDX25Q9UHL0 483 aaKnown RBP16.52■□□□□ 0.24
LMO4-201ENST00000370542 CD207Q9UJ71 328 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 KCNJ14Q9UNX9 436 aa16.52■□□□□ 0.24
LMO4-201ENST00000370542 CACNA1HO95180 2353 aa16.52■□□□□ 0.23
LMO4-201ENST00000370542 PTPRZ1P23471 2315 aaPredicted RBP16.52■□□□□ 0.23
LMO4-201ENST00000370542 ZFHX4Q86UP3 3567 aa16.52■□□□□ 0.23
LMO4-201ENST00000370542 DMDP11532 3685 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 EML1O00423 815 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 TBX3O15119 743 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 GCFC2P16383 781 aaKnown RBP16.51■□□□□ 0.23
LMO4-201ENST00000370542 ATF7P17544 494 aaPredicted RBP16.51■□□□□ 0.23
LMO4-201ENST00000370542 LAG3P18627 525 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 PSMC5P62195 406 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 TEX35Q5T0J7 233 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 TMEM184AQ6ZMB5 413 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 ANO5Q75V66 913 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 LUZP1Q86V48 1076 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 RSPH1Q8WYR4 309 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 CDCA3Q99618 268 aaPredicted RBP16.51■□□□□ 0.23
LMO4-201ENST00000370542 SRRTQ9BXP5 876 aaKnown RBP16.51■□□□□ 0.23
LMO4-201ENST00000370542 TLR9Q9NR96 1032 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 CHST12Q9NRB3 414 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 ARGLU1Q9NWB6 273 aaPredicted RBP16.51■□□□□ 0.23
LMO4-201ENST00000370542 DACT1Q9NYF0 836 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 PPME1Q9Y570 386 aa16.51■□□□□ 0.23
LMO4-201ENST00000370542 KRT37O76014 449 aa16.5■□□□□ 0.23
LMO4-201ENST00000370542 ERVFC1P60507 584 aa16.5■□□□□ 0.23
LMO4-201ENST00000370542 CLLU1OSQ5K130 101 aa16.5■□□□□ 0.23
LMO4-201ENST00000370542 EP400NLQ6ZTU2 488 aa16.5■□□□□ 0.23
LMO4-201ENST00000370542 ASCL5Q7RTU5 278 aa16.5■□□□□ 0.23
LMO4-201ENST00000370542 NEK8Q86SG6 692 aa16.5■□□□□ 0.23
LMO4-201ENST00000370542 ZNF410Q86VK4 478 aa16.5■□□□□ 0.23
LMO4-201ENST00000370542 SUGP1Q8IWZ8 645 aaKnown RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms