RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 PTENP60484 403 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 HMGN5P82970 282 aaKnown RBP17.97■□□□□ 0.47
VMA21-202ENST00000370361 CYP4A11Q02928 519 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 CTTNQ14247 550 aaKnown RBP17.97■□□□□ 0.47
VMA21-202ENST00000370361 CES5AQ6NT32 575 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 VPS52Q8N1B4 723 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 VN1R2Q8NFZ6 395 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 EDAQ92838 391 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 MTMR9Q96QG7 549 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 ZBP1Q9H171 429 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 S1PR5Q9H228 398 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 NR2E1Q9Y466 385 aa17.97■□□□□ 0.47
VMA21-202ENST00000370361 INPPL1O15357 1258 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 LARGE1O95461 756 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 SEC24BO95487 1268 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 GALTP07902 379 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 HOXA11P31270 313 aaPredicted RBP17.96■□□□□ 0.47
VMA21-202ENST00000370361 PBX3P40426 434 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 BMP8AQ7Z5Y6 402 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 ZNF579Q8NAF0 562 aaKnown RBP17.96■□□□□ 0.47
VMA21-202ENST00000370361 ZSCAN31Q96LW9 406 aaPredicted RBP17.96■□□□□ 0.47
VMA21-202ENST00000370361 FAM193BQ96PV7 902 aaPredicted RBP17.96■□□□□ 0.47
VMA21-202ENST00000370361 NRDE2Q9H7Z3 1164 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 TUFT1Q9NNX1 390 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 RAPGEFL1Q9UHV5 662 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 MUTYHQ9UIF7 546 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 SSX2IPQ9Y2D8 614 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 HCFC2Q9Y5Z7 792 aa17.96■□□□□ 0.47
VMA21-202ENST00000370361 CXCL14O95715 111 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 MUTP22033 750 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 RARRES1P49788 294 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 AGMOQ6ZNB7 445 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 MCPH1Q8NEM0 835 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 ERMNQ8TAM6 284 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 LPPQ93052 612 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 RIPOR3Q96MK2 946 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 ADAM7Q9H2U9 754 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 FOXP1Q9H334 677 aaPredicted RBP17.95■□□□□ 0.46
VMA21-202ENST00000370361 SH2B1Q9NRF2 756 aaPredicted RBP17.95■□□□□ 0.46
VMA21-202ENST00000370361 INPP5FQ9Y2H2 1132 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 C5orf42Q9H799 3197 aa17.95■□□□□ 0.46
VMA21-202ENST00000370361 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.94■□□□□ 0.46
VMA21-202ENST00000370361 FAM205CA6NFA0 338 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 JAK2O60674 1132 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 CLASP2O75122 1294 aaKnown RBP17.94■□□□□ 0.46
VMA21-202ENST00000370361 NR1I2O75469 434 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 ALDH2P05091 517 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 TXKP42681 527 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 MTHFRP42898 656 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 TRAPPC10P48553 1259 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 SYCE2Q6PIF2 218 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 ELMSAN1Q6PJG2 1045 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 C8orf76Q96K31 380 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 PRIMPOLQ96LW4 560 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 EMILIN2Q9BXX0 1053 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 MINDY3Q9H8M7 445 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 XPNPEP1Q9NQW7 623 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 DBR1Q9UK59 544 aaKnown RBP17.94■□□□□ 0.46
VMA21-202ENST00000370361 STK24Q9Y6E0 443 aa17.94■□□□□ 0.46
VMA21-202ENST00000370361 NT5C1B-RDH14C9J2C7 533 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 INO80B-WBP1J3KQ70 363 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 TSPAN1O60635 241 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 ITGA4P13612 1032 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 ARL2P36404 184 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 RBM25P49756 843 aaKnown RBP17.93■□□□□ 0.46
VMA21-202ENST00000370361 UBXN11Q5T124 520 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 LLGL2Q6P1M3 1020 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 RPGRIP1Q96KN7 1286 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 NACC1Q96RE7 527 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 PRRX2Q99811 253 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 POLR3CQ9BUI4 534 aaPredicted RBP17.93■□□□□ 0.46
VMA21-202ENST00000370361 TRIM6Q9C030 488 aaPredicted RBP17.93■□□□□ 0.46
VMA21-202ENST00000370361 CSRNP2Q9H175 543 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 DPP7Q9UHL4 492 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 GIT1Q9Y2X7 761 aa17.93■□□□□ 0.46
VMA21-202ENST00000370361 C1RP00736 705 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 MCM7P33993 719 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 CA8P35219 290 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 SLC11A1P49279 550 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 ZXDAP98168 799 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 MBTD1Q05BQ5 628 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 C8orf34Q49A92 452 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 HAUS3Q68CZ6 603 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 TRIM67Q6ZTA4 783 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 GPR65Q8IYL9 337 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 C2orf40Q9H1Z8 148 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 FAN1Q9Y2M0 1017 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 IPPQ9Y573 584 aa17.92■□□□□ 0.46
VMA21-202ENST00000370361 MEIS3P2A8K0S8 358 aa17.91■□□□□ 0.46
VMA21-202ENST00000370361 RPA1P27694 616 aa17.91■□□□□ 0.46
VMA21-202ENST00000370361 RBM10P98175 930 aaKnown RBP17.91■□□□□ 0.46
VMA21-202ENST00000370361 SIGLEC14Q08ET2 396 aa17.91■□□□□ 0.46
VMA21-202ENST00000370361 CAPSQ13938 189 aa17.91■□□□□ 0.46
VMA21-202ENST00000370361 FBXO18Q8NFZ0 1043 aa17.91■□□□□ 0.46
VMA21-202ENST00000370361 GBP3Q9H0R5 595 aa17.91■□□□□ 0.46
VMA21-202ENST00000370361 MRPL17Q9NRX2 175 aaKnown RBP17.91■□□□□ 0.46
VMA21-202ENST00000370361 BMP2KQ9NSY1 1161 aaPredicted RBP17.91■□□□□ 0.46
VMA21-202ENST00000370361 DNAJB4Q9UDY4 337 aa17.91■□□□□ 0.46
VMA21-202ENST00000370361 NOL7Q9UMY1 257 aaKnown RBP17.91■□□□□ 0.46
VMA21-202ENST00000370361 USTQ9Y2C2 406 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms