RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ARSHQ5FYA8 562 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 EXOC3L1Q86VI1 746 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 EPS8L3Q8TE67 593 aaKnown RBP18.76■□□□□ 0.59
CHTOP-203ENST00000368690 SH3GL3Q99963 347 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 STK33Q9BYT3 514 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 TRIM7Q9C029 511 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 KCNQ5Q9NR82 932 aa18.76■□□□□ 0.59
CHTOP-203ENST00000368690 ARFGEF1Q9Y6D6 1849 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 A6NHS1 94 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 E7ENQ6 273 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 MARCH6O60337 910 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 AKAP3O75969 853 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 KRT16P08779 473 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 CYP1B1Q16678 543 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 CMPK2Q5EBM0 449 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 C11orf63Q6NUN7 778 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 SPATA21Q7Z572 469 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 PODNQ7Z5L7 613 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 APLFQ8IW19 511 aaPredicted RBP18.75■□□□□ 0.59
CHTOP-203ENST00000368690 RHOT2Q8IXI1 618 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 ART4Q93070 314 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 PIM2Q9P1W9 311 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 CDK5RAP2Q96SN8 1893 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 NPHP3-ACAD11A0A0J9YXS1 232 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 KRT18P05783 430 aaKnown RBP18.75■□□□□ 0.59
CHTOP-203ENST00000368690 BTDP43251 543 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 IFNAR2P48551 515 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 ACVR2BQ13705 512 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 ANKRD20A2Q5SQ80 823 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 ANKRD20A1Q5TYW2 823 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 ANKRD20A3Q5VUR7 823 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 RNF43Q68DV7 783 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 SUPT20HQ8NEM7 779 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 TGFBRAP1Q8WUH2 860 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 COA7Q96BR5 231 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 RAB3IPQ96QF0 476 aaPredicted RBP18.75■□□□□ 0.59
CHTOP-203ENST00000368690 UBA5Q9GZZ9 404 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 ADAM22Q9P0K1 906 aa18.75■□□□□ 0.59
CHTOP-203ENST00000368690 PLIN4Q96Q06 1357 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 SRCAPQ6ZRS2 3230 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 ANKRD62A6NC57 917 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 SMIM23A6NLE4 172 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 USP17L5A8MUK1 530 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 ABLIM1O14639 778 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 NR3C1P04150 777 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 HOXD13P35453 343 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 TGFB2P61812 414 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 MAP2K1Q02750 393 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-203ENST00000368690 DCAF17Q5H9S7 520 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-203ENST00000368690 SLF2Q8IX21 1173 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 UBL4BQ8N7F7 174 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 PRELID2Q8N945 189 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 DYDC1Q8WWB3 177 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 CKAP2Q8WWK9 683 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 CEP95Q96GE4 821 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 RTFDC1Q9BY42 306 aaPredicted RBP18.74■□□□□ 0.59
CHTOP-203ENST00000368690 FGFR1OP2Q9NVK5 253 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 CD2APQ9Y5K6 639 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 PFASO15067 1338 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 POTEFA5A3E0 1075 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 TCP11X1B4DZS4 312 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 POTEIP0CG38 1075 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 POTEJP0CG39 1038 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 KRT13P13646 458 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 CASP5P51878 434 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 SARNPP82979 210 aaKnown RBP18.74■□□□□ 0.59
CHTOP-203ENST00000368690 GIT2Q14161 759 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 NFIL3Q16649 462 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 POTEEQ6S8J3 1075 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 ERICH1Q86X53 443 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 RTKN2Q8IZC4 609 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 ALG3Q92685 438 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 GRAMD1AQ96CP6 724 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 BORCS6Q96GS4 357 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 USP40Q9NVE5 1235 aa18.74■□□□□ 0.59
CHTOP-203ENST00000368690 PNMA6FA0A0J9YX94 578 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 POTEB3A0JP26 581 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 POTECB2RU33 542 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 SKAP2O75563 359 aaPredicted RBP18.73■□□□□ 0.59
CHTOP-203ENST00000368690 SNHG28P0DPA3 235 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 PARP6Q2NL67 630 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 POTEBQ6S5H4 581 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 GLYCTKQ8IVS8 523 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 CERS5Q8N5B7 392 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 MORC4Q8TE76 937 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 C18orf8Q96DM3 657 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 FRMPD4Q14CM0 1322 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 IGSF9BQ9UPX0 1349 aa18.73■□□□□ 0.59
CHTOP-203ENST00000368690 ATP5HO75947 161 aa18.72■□□□□ 0.59
CHTOP-203ENST00000368690 SCNN1DP51172 638 aa18.72■□□□□ 0.59
CHTOP-203ENST00000368690 CACNB1Q02641 598 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-203ENST00000368690 RPS6KC1Q96S38 1066 aa18.72■□□□□ 0.59
CHTOP-203ENST00000368690 ZNF277Q9NRM2 450 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-203ENST00000368690 STK24Q9Y6E0 443 aa18.72■□□□□ 0.59
CHTOP-203ENST00000368690 DALRD3Q5D0E6 543 aaKnown RBP18.72■□□□□ 0.59
CHTOP-203ENST00000368690 TCERG1LQ5VWI1 586 aa18.72■□□□□ 0.59
CHTOP-203ENST00000368690 SLFN12Q8IYM2 578 aa18.72■□□□□ 0.59
CHTOP-203ENST00000368690 SYT2Q8N9I0 419 aaPredicted RBP18.72■□□□□ 0.59
CHTOP-203ENST00000368690 MICAL1Q8TDZ2 1067 aa18.72■□□□□ 0.59
CHTOP-203ENST00000368690 PRCCQ92733 491 aaPredicted RBP18.72■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms