RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 CDC42EP4Q9H3Q1 356 aaKnown RBP19.24■□□□□ 0.67
CHTOP-201ENST00000368686 KANSL2Q9H9L4 492 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 BARHL2Q9NY43 387 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 LNPEPQ9UIQ6 1025 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 COMMD3-BMI1R4GMX3 469 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 KCPQ6ZWJ8 1503 aa19.24■□□□□ 0.67
CHTOP-201ENST00000368686 DDX3XO00571 662 aaKnown RBP eCLIP19.23■□□□□ 0.67
CHTOP-201ENST00000368686 ALAS1P13196 640 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 PLCG2P16885 1265 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 SCNN1BP51168 640 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 SLC34A1Q06495 639 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 COASYQ13057 564 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 KHDC1Q4VXA5 237 aaKnown RBP19.23■□□□□ 0.67
CHTOP-201ENST00000368686 ZNF449Q6P9G9 518 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 SLC35G2Q8TBE7 412 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 RBM46Q8TBY0 533 aaKnown RBP19.23■□□□□ 0.67
CHTOP-201ENST00000368686 LZICQ8WZA0 190 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 HAPLN3Q96S86 360 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 OSGEPQ9NPF4 335 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 MAGEB2O15479 319 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 TMEM253P0C7T8 217 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 ZNF211Q13398 564 aaPredicted RBP19.23■□□□□ 0.67
CHTOP-201ENST00000368686 MOGSQ13724 837 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 RCN1Q15293 331 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 FAM26FQ5R3K3 315 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 LMOD2Q6P5Q4 547 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 ZNF365Q70YC5 407 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 HEATR3Q7Z4Q2 680 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 NEK8Q86SG6 692 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 CCDC25Q86WR0 208 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 ZC3H3Q8IXZ2 948 aaKnown RBP19.23■□□□□ 0.67
CHTOP-201ENST00000368686 PREBQ9HCU5 417 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 ABCF2Q9UG63 623 aa19.23■□□□□ 0.67
CHTOP-201ENST00000368686 GGPS1O95749 300 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 SLC9A1P19634 815 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 CTNNA2P26232 953 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 FOXN2P32314 431 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 AP1B1Q10567 949 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 DBN1Q16643 649 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 FAM47EQ6ZV65 393 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 NELFCDQ8IXH7 590 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 PRELID2Q8N945 189 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 STKLD1Q8NE28 680 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 C7orf43Q8WVR3 580 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 NRG4Q8WWG1 115 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 RBM17Q96I25 401 aaKnown RBP19.22■□□□□ 0.67
CHTOP-201ENST00000368686 RIOK1Q9BRS2 568 aaKnown RBP19.22■□□□□ 0.67
CHTOP-201ENST00000368686 DHX36Q9H2U1 1008 aaKnown RBP19.22■□□□□ 0.67
CHTOP-201ENST00000368686 ACTL7BQ9Y614 415 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 MAP3K7O43318 606 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 TCEA3O75764 348 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 LSAMPQ13449 338 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 CCDC137Q6PK04 289 aaKnown RBP19.22■□□□□ 0.67
CHTOP-201ENST00000368686 CENPKQ9BS16 269 aa19.22■□□□□ 0.67
CHTOP-201ENST00000368686 PASKQ96RG2 1323 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 TRPM3Q9HCF6 1732 aaPredicted RBP19.21■□□□□ 0.67
CHTOP-201ENST00000368686 ACSL3O95573 720 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 CDR2Q01850 454 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 CALCOCO2Q13137 446 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 EXOC3L4Q17RC7 722 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 ANKRD23Q86SG2 305 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 ZNF526Q8TF50 670 aaPredicted RBP19.21■□□□□ 0.67
CHTOP-201ENST00000368686 CTNNBL1Q8WYA6 563 aaPredicted RBP19.21■□□□□ 0.67
CHTOP-201ENST00000368686 MIS12Q9H081 205 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 SAR1AQ9NR31 198 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 LGALS13Q9UHV8 139 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 HDAC9Q9UKV0 1011 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 CBX6O95503 412 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 DESP17661 470 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 PON1P27169 355 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 FXR2P51116 673 aaKnown RBP eCLIP19.21■□□□□ 0.67
CHTOP-201ENST00000368686 JAM2P57087 298 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 TMEM266Q2M3C6 531 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 SH2D4BQ5SQS7 431 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 PPP4R3CPQ6ZMV5 832 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 ZNF184Q99676 751 aaPredicted RBP19.21■□□□□ 0.67
CHTOP-201ENST00000368686 IL1RAPL1Q9NZN1 696 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 PHTF1Q9UMS5 762 aa19.21■□□□□ 0.67
CHTOP-201ENST00000368686 IRS4O14654 1257 aaPredicted RBP19.2■□□□□ 0.66
CHTOP-201ENST00000368686 CAPN9O14815 690 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 LMNB1P20700 586 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 TXKP42681 527 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 FAM47AQ5JRC9 791 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 TTC27Q6P3X3 843 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 ALG3Q92685 438 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 IWS1Q96ST2 819 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 RAB34Q9BZG1 259 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 DDX43Q9NXZ2 648 aaKnown RBP19.2■□□□□ 0.66
CHTOP-201ENST00000368686 ZNF212Q9UDV6 495 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 MIF4GDA9UHW6 222 aaKnown RBP19.2■□□□□ 0.66
CHTOP-201ENST00000368686 LYNP07948 512 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 EDRF1Q3B7T1 1238 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 OLFM3Q96PB7 478 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 STX18Q9P2W9 335 aaKnown RBP19.2■□□□□ 0.66
CHTOP-201ENST00000368686 CIDEBQ9UHD4 219 aa19.2■□□□□ 0.66
CHTOP-201ENST00000368686 ZNF330Q9Y3S2 320 aaPredicted RBP19.2■□□□□ 0.66
CHTOP-201ENST00000368686 COL1A1P02452 1464 aaPredicted RBP19.19■□□□□ 0.66
CHTOP-201ENST00000368686 PAPPAQ13219 1627 aa19.19■□□□□ 0.66
CHTOP-201ENST00000368686 GRM4Q14833 912 aa19.19■□□□□ 0.66
CHTOP-201ENST00000368686 RGS9BPQ6ZS82 235 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms