RNA–Protein interactions for RNA: ENST00000368662.9

TUBE1-202, Transcript of tubulin epsilon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBE1, Length 2,142 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-202ENST00000368662 FANCCQ00597 558 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 HIC1Q14526 733 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 ZPBP2Q6X784 338 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 SRGAP1Q7Z6B7 1085 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 CNOT6LQ96LI5 555 aaKnown RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 PRIMPOLQ96LW4 560 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 MRPL4Q9BYD3 311 aaKnown RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 INO80BQ9C086 356 aaPredicted RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 CCDC113Q9H0I3 377 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 FAM49AQ9H0Q0 323 aaPredicted RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 IFT122Q9HBG6 1241 aa13.49□□□□□ -0.25
TUBE1-202ENST00000368662 LIMA1Q9UHB6 759 aaKnown RBP13.49□□□□□ -0.25
TUBE1-202ENST00000368662 A0A087WZ62 844 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 LRRC10BA6NIK2 292 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 INO80B-WBP1J3KQ70 363 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 ACKR2O00590 384 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 KIAA0391O15091 583 aaKnown RBP13.48□□□□□ -0.25
TUBE1-202ENST00000368662 CLIC2O15247 247 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 PRKCBP05771 671 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 GARTP22102 1010 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 MARSP56192 900 aaKnown RBP13.48□□□□□ -0.25
TUBE1-202ENST00000368662 FAM187BQ17R55 369 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 FILIP1LQ4L180 1135 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 HSP90AA4PQ58FG1 418 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 SLFN12LQ6IEE8 588 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 GDF6Q6KF10 455 aaPredicted RBP13.48□□□□□ -0.25
TUBE1-202ENST00000368662 ARMCX5Q6P1M9 558 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 RUFY4Q6ZNE9 571 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 RPAINQ86UA6 219 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 SERINC5Q86VE9 423 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 IRF2BP1Q8IU81 584 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 DNAJB3Q8WWF6 145 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 FDXACB1Q9BRP7 624 aaPredicted RBP13.48□□□□□ -0.25
TUBE1-202ENST00000368662 MKNK1Q9BUB5 465 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 GCOM2Q9BZD3 368 aaPredicted RBP13.48□□□□□ -0.25
TUBE1-202ENST00000368662 FZD8Q9H461 694 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 FRMD4BQ9Y2L6 1034 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 GRIN2DO15399 1336 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 MYCP01106 439 aaPredicted RBP13.48□□□□□ -0.25
TUBE1-202ENST00000368662 UBASH3AP57075 661 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 ZNF200P98182 395 aaPredicted RBP13.48□□□□□ -0.25
TUBE1-202ENST00000368662 MBTD1Q05BQ5 628 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 PTGISQ16647 500 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 SLC43A3Q8NBI5 491 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 PPP1R13LQ8WUF5 828 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 METTL14Q9HCE5 456 aaKnown RBP13.48□□□□□ -0.25
TUBE1-202ENST00000368662 DMAC2Q9NW81 257 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 NOD1Q9Y239 953 aa13.48□□□□□ -0.25
TUBE1-202ENST00000368662 M0QZ92 97 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 GPR32O75388 356 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 SGPL1O95470 568 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 ADCY5O95622 1261 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 EPB41P11171 864 aaKnown RBP13.47□□□□□ -0.25
TUBE1-202ENST00000368662 PSMC2P35998 433 aaKnown RBP13.47□□□□□ -0.25
TUBE1-202ENST00000368662 CCDC40Q4G0X9 1142 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 FRMD5Q7Z6J6 570 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 CREBRFQ8IUR6 639 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 EEF2KMTQ96G04 330 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 MRFAP1L1Q96HT8 127 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 CRISPLD2Q9H0B8 497 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 ADAMTS10Q9H324 1103 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 STYXL1Q9Y6J8 313 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 SIP14410 1827 aa13.47□□□□□ -0.25
TUBE1-202ENST00000368662 EXOC3O60645 756 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 MTIF2P46199 727 aaKnown RBP13.46□□□□□ -0.25
TUBE1-202ENST00000368662 PTK7Q13308 1070 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
TUBE1-202ENST00000368662 KRT31Q15323 416 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 KIZQ2M2Z5 673 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 XXYLT1Q8NBI6 393 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 U2AF1L4Q8WU68 220 aaKnown RBP13.46□□□□□ -0.25
TUBE1-202ENST00000368662 POMGNT1Q8WZA1 660 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 KIAA1586Q9HCI6 787 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 PRDM10Q9NQV6 1147 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 HSPBP1Q9NZL4 362 aa13.46□□□□□ -0.25
TUBE1-202ENST00000368662 ARVCFO00192 962 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 MAPK13O15264 365 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 AP5Z1O43299 807 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 CAND2O75155 1236 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 TOM1L1O75674 476 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 PRKCSHP14314 528 aaPredicted RBP13.46□□□□□ -0.26
TUBE1-202ENST00000368662 ADSSP30520 456 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 ZNF75DP51815 510 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 CRYBB1P53674 252 aaPredicted RBP13.46□□□□□ -0.26
TUBE1-202ENST00000368662 PPP2R3AQ06190 1150 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 NCBP1Q09161 790 aaKnown RBP13.46□□□□□ -0.26
TUBE1-202ENST00000368662 CEP135Q66GS9 1140 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 CBWD1Q9BRT8 395 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 TUBGCP2Q9BSJ2 902 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 IKZF4Q9H2S9 585 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 IFNKQ9P0W0 207 aa13.46□□□□□ -0.26
TUBE1-202ENST00000368662 ARMCX3Q9UH62 379 aaPredicted RBP13.46□□□□□ -0.26
TUBE1-202ENST00000368662 CNTNAP2Q9UHC6 1331 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 A0A1B0GTH6 734 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 ANKRD63C9JTQ0 380 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 AKAP3O75969 853 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 ERLIN2O94905 339 aa13.45□□□□□ -0.26
TUBE1-202ENST00000368662 LDHAP00338 332 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 TFRCP02786 760 aaKnown RBP13.45□□□□□ -0.26
TUBE1-202ENST00000368662 SFPQP23246 707 aaKnown RBP eCLIP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms