RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 TRIM16O95361 564 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 SSBP05455 408 aaKnown RBP eCLIP11.87□□□□□ -0.51
TUBE1-201ENST00000368657 EMP3P54852 163 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 ZNF598Q86UK7 904 aaKnown RBP11.87□□□□□ -0.51
TUBE1-201ENST00000368657 BCL7CQ8WUZ0 217 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-201ENST00000368657 TRAPPC12Q8WVT3 735 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 DNASE1L2Q92874 299 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 CDHR1Q96JP9 859 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 RPS6KC1Q96S38 1066 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 UBL7Q96S82 380 aaPredicted RBP11.87□□□□□ -0.51
TUBE1-201ENST00000368657 VN1R3Q9BXE9 311 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 NRDE2Q9H7Z3 1164 aa11.87□□□□□ -0.51
TUBE1-201ENST00000368657 K7ESF4 209 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 TEX28O15482 410 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 MPLP40238 635 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 AK2P54819 239 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 FGD1P98174 961 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 ASPRV1Q53RT3 343 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 HEATR6Q6AI08 1181 aaKnown RBP11.86□□□□□ -0.51
TUBE1-201ENST00000368657 KIAA1211LQ6NV74 962 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 PLPPR4Q7Z2D5 763 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 FGF13Q92913 245 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 RXFP1Q9HBX9 757 aa11.86□□□□□ -0.51
TUBE1-201ENST00000368657 C2orf72A6NCS6 295 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 J3QKU1 62 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 ECI2O75521 394 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 ALDH2P05091 517 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 URODP06132 367 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 RNASELQ05823 741 aaKnown RBP11.85□□□□□ -0.51
TUBE1-201ENST00000368657 KIZQ2M2Z5 673 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 RRP12Q5JTH9 1297 aaKnown RBP11.85□□□□□ -0.51
TUBE1-201ENST00000368657 DGKHQ86XP1 1220 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 GAB3Q8WWW8 586 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 FAM3CQ92520 227 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 ZC3H10Q96K80 434 aaKnown RBP11.85□□□□□ -0.51
TUBE1-201ENST00000368657 OSMRQ99650 979 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 KXD1Q9BQD3 176 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 SLC32A1Q9H598 525 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 DACT1Q9NYF0 836 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 MYH6P13533 1939 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 USP9XQ93008 2570 aaPredicted RBP11.85□□□□□ -0.51
TUBE1-201ENST00000368657 FRMPD4Q14CM0 1322 aa11.85□□□□□ -0.51
TUBE1-201ENST00000368657 C2CD2LO14523 706 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 ATP9AO75110 1047 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 SOD2P04179 222 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 PRB1P04280 392 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 SPATA31D3P0C874 917 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 MYBP10242 640 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 CHRNB1P11230 501 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 KCNA2P16389 499 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 SLC11A1P49279 550 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 STAT5BP51692 787 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 SCAPQ12770 1279 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 PCNX4Q63HM2 1172 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 SPATA31D4Q6ZUB0 917 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 GRASPQ7Z6J2 395 aaPredicted RBP11.84□□□□□ -0.51
TUBE1-201ENST00000368657 LSM14AQ8ND56 463 aaKnown RBP11.84□□□□□ -0.51
TUBE1-201ENST00000368657 GPRASP2Q96D09 838 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 PCYT2Q99447 389 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 SMOC1Q9H4F8 434 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 CCDC86Q9H6F5 360 aaKnown RBP11.84□□□□□ -0.51
TUBE1-201ENST00000368657 RTN4Q9NQC3 1192 aaKnown RBP11.84□□□□□ -0.51
TUBE1-201ENST00000368657 TBC1D13Q9NVG8 400 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 SDK1Q7Z5N4 2213 aa11.84□□□□□ -0.51
TUBE1-201ENST00000368657 MTCL1Q9Y4B5 1905 aaKnown RBP11.84□□□□□ -0.51
TUBE1-201ENST00000368657 CCDC163A0A0D9SF12 145 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 ZBTB5O15062 677 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 MAFGO15525 162 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 GPR32O75388 356 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 ZMYND10O75800 440 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 RPP40O75818 363 aaKnown RBP11.83□□□□□ -0.52
TUBE1-201ENST00000368657 AKAP3O75969 853 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 C1QL1O75973 258 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 SLC26A2P50443 739 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 CCDC178Q5BJE1 867 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 NOMO2Q5JPE7 1267 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 ZKSCAN2Q63HK3 967 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 KBTBD6Q86V97 674 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 TMEFF1Q8IYR6 380 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 SEC62Q99442 399 aaKnown RBP11.83□□□□□ -0.52
TUBE1-201ENST00000368657 TMEM9BQ9NQ34 198 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 TRPV5Q9NQA5 729 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 PLSCR2Q9NRY7 297 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 FAN1Q9Y2M0 1017 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 TICRRQ7Z2Z1 1910 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 KALRNO60229 2985 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 ASXL3Q9C0F0 2248 aa11.83□□□□□ -0.52
TUBE1-201ENST00000368657 MYO18BQ8IUG5 2567 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 CAPN8A6NHC0 703 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 TRIM6-TRIM34B2RNG4 842 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 TGM5O43548 720 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 HBP1O60381 514 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 HNRNPA1P09651 372 aaKnown RBP eCLIP11.82□□□□□ -0.52
TUBE1-201ENST00000368657 PARP1P09874 1014 aaKnown RBP11.82□□□□□ -0.52
TUBE1-201ENST00000368657 SKIP12755 728 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 PTGDRQ13258 359 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 LRRC32Q14392 662 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 GAS6Q14393 721 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 LILRA6Q6PI73 481 aa11.82□□□□□ -0.52
TUBE1-201ENST00000368657 GLB1LQ6UWU2 654 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms