RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 MYBP10242 640 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 MAPTP10636 758 aaKnown RBP15.29■□□□□ 0.04
TPM3-211ENST00000368531 ZSCAN20P17040 1043 aaPredicted RBP15.29■□□□□ 0.04
TPM3-211ENST00000368531 ARF4P18085 180 aaPredicted RBP15.29■□□□□ 0.04
TPM3-211ENST00000368531 CASP5P51878 434 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 NCBP1Q09161 790 aaKnown RBP15.29■□□□□ 0.04
TPM3-211ENST00000368531 STRN3Q13033 797 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 PRPF4BQ13523 1007 aaKnown RBP15.29■□□□□ 0.04
TPM3-211ENST00000368531 SHHQ15465 462 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 FAM26FQ5R3K3 315 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 C9orf50Q5SZB4 431 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 ISM2Q6H9L7 571 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 PSRC1Q6PGN9 363 aaPredicted RBP15.29■□□□□ 0.04
TPM3-211ENST00000368531 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.29■□□□□ 0.044e-6■□□□□ 9.7
TPM3-211ENST00000368531 TAS1R3Q7RTX0 852 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 ZNF720Q7Z2F6 126 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 RTN4RL1Q86UN2 441 aaPredicted RBP15.29■□□□□ 0.04
TPM3-211ENST00000368531 GLIS3Q8NEA6 775 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 APBB2Q92870 758 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 SMARCE1Q969G3 411 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 FIZ1Q96SL8 496 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 FZD8Q9H461 694 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 TMEM134Q9H6X4 195 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 PCDHA5Q9Y5H7 936 aa15.29■□□□□ 0.04
TPM3-211ENST00000368531 H0YCG3 227 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 ACKR2O00590 384 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 PRPF6O94906 941 aaKnown RBP15.28■□□□□ 0.04
TPM3-211ENST00000368531 SMC2O95347 1197 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 AMHR2Q16671 573 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 NT5DC1Q5TFE4 455 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 TWF2Q6IBS0 349 aaKnown RBP15.28■□□□□ 0.04
TPM3-211ENST00000368531 CHRDL2Q6WN34 429 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 BICD1Q96G01 975 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 TARS2Q9BW92 718 aaKnown RBP15.28■□□□□ 0.04
TPM3-211ENST00000368531 AGPAT5Q9NUQ2 364 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 TBX20Q9UMR3 447 aa15.28■□□□□ 0.04
TPM3-211ENST00000368531 PTPRSQ13332 1948 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 ABHD14A-ACY1A0A1B0GW23 586 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 ENPP3O14638 875 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 MBD3O95983 291 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 HOXA11P31270 313 aaPredicted RBP15.27■□□□□ 0.04
TPM3-211ENST00000368531 KCNJ6P48051 423 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 DSC3Q14574 896 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 FAM187BQ17R55 369 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 SLC17A8Q8NDX2 589 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 LINC01599Q8WXQ3 324 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 HERVK_113Q902F9 699 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 RNPC3Q96LT9 517 aaKnown RBP15.27■□□□□ 0.04
TPM3-211ENST00000368531 FTHL17Q9BXU8 183 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 MRPL4Q9BYD3 311 aaKnown RBP15.27■□□□□ 0.04
TPM3-211ENST00000368531 NUP62CLQ9H1M0 184 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 IKZF4Q9H2S9 585 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 CLSTN2Q9H4D0 955 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 OLFML3Q9NRN5 406 aa15.27■□□□□ 0.04
TPM3-211ENST00000368531 CXXC1Q9P0U4 656 aaPredicted RBP15.27■□□□□ 0.04
TPM3-211ENST00000368531 CNTNAP2Q9UHC6 1331 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.26■□□□□ 0.03
TPM3-211ENST00000368531 BIN1O00499 593 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 UPP2O95045 317 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 MATR3P43243 847 aaKnown RBP eCLIP15.26■□□□□ 0.03
TPM3-211ENST00000368531 DEFB103AP81534 67 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 GTF2BQ00403 316 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 EHHADHQ08426 723 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 KCNA1Q09470 495 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 STK4Q13043 487 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 ATF7IP2Q5U623 682 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 EEF1DP3Q658K8 133 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 FAM117BQ6P1L5 589 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 NOTUMQ6P988 496 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 STXBP4Q6ZWJ1 553 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 TMCO2Q7Z6W1 182 aaPredicted RBP15.26■□□□□ 0.03
TPM3-211ENST00000368531 ZBTB33Q86T24 672 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 NELFCDQ8IXH7 590 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 ELOA2Q8IYF1 753 aaPredicted RBP15.26■□□□□ 0.03
TPM3-211ENST00000368531 MYOCDQ8IZQ8 938 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 SYCP3Q8IZU3 236 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 RNF169Q8NCN4 708 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 ZBTB45Q96K62 511 aaPredicted RBP15.26■□□□□ 0.03
TPM3-211ENST00000368531 PRIMPOLQ96LW4 560 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 CHST12Q9NRB3 414 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 MAPK8IP1Q9UQF2 711 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 GDAQ9Y2T3 454 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 PCDHB13Q9Y5F0 798 aa15.26■□□□□ 0.03
TPM3-211ENST00000368531 N4BP3O15049 544 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 PPP1R37O75864 691 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 BAIAP3O94812 1187 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 RHOBTB3O94955 611 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 NPTXRO95502 500 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 HARSP12081 509 aaKnown RBP15.25■□□□□ 0.03
TPM3-211ENST00000368531 AXLP30530 894 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 LIG4P49917 911 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 WDR5P61964 334 aaKnown RBP15.25■□□□□ 0.03
TPM3-211ENST00000368531 PSMD2Q13200 908 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 KCNB1Q14721 858 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 PCBP1Q15365 356 aaKnown RBP eCLIP15.25■□□□□ 0.03
TPM3-211ENST00000368531 L1TD1Q5T7N2 865 aaKnown RBP15.25■□□□□ 0.03
TPM3-211ENST00000368531 SMYD4Q8IYR2 804 aaPredicted RBP15.25■□□□□ 0.03
TPM3-211ENST00000368531 ACCSQ96QU6 501 aa15.25■□□□□ 0.03
TPM3-211ENST00000368531 ACO2Q99798 780 aaKnown RBP15.25■□□□□ 0.03
TPM3-211ENST00000368531 TCHPQ9BT92 498 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms