RNA–Protein interactions for RNA: ENST00000368527.7

TPM3-209, Transcript of tropomyosin 3, humanhuman

TSL 4

Gene TPM3, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-209ENST00000368527 EIF3BP55884 814 aaKnown RBP11.05□□□□□ -0.64
TPM3-209ENST00000368527 BPIFB4P59827 614 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 RPS6P62753 249 aaKnown RBP11.05□□□□□ -0.64
TPM3-209ENST00000368527 UBXN2AP68543 259 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 MRPS9P82933 396 aaKnown RBP11.05□□□□□ -0.64
TPM3-209ENST00000368527 ITGB3BPQ13352 177 aaPredicted RBP11.05□□□□□ -0.64
TPM3-209ENST00000368527 BIRC3Q13489 604 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 CBWD6Q4V339 395 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 BRDTQ58F21 947 aaPredicted RBP11.05□□□□□ -0.64
TPM3-209ENST00000368527 XKR9Q5GH70 373 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 CBWD3Q5JTY5 395 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 CBWD5Q5RIA9 395 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 KRT39Q6A163 491 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 VSIG10LQ86VR7 867 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 ZNF677Q86XU0 584 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 GLYCTKQ8IVS8 523 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 SCYL3Q8IZE3 742 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 IQCKQ8N0W5 287 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 METTL13Q8N6R0 699 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 LMO3Q8TAP4 145 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 LNX1Q8TBB1 728 aaPredicted RBP11.05□□□□□ -0.64
TPM3-209ENST00000368527 SLC35G2Q8TBE7 412 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 MAIP1Q8WWC4 291 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 SEC14L1Q92503 715 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 TRIM11Q96F44 468 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 MS4A14Q96JA4 679 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 IFT74Q96LB3 600 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 TEPSINQ96N21 525 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 TMEM8AQ9HCN3 771 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 UVRAGQ9P2Y5 699 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 PARP2Q9UGN5 583 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 LCMT1Q9UIC8 334 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 ZNF112Q9UJU3 913 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 TBX20Q9UMR3 447 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 NOC2LQ9Y3T9 749 aaKnown RBP11.05□□□□□ -0.64
TPM3-209ENST00000368527 ASTN2O75129 1339 aaPredicted RBP11.05□□□□□ -0.64
TPM3-209ENST00000368527 EMSYQ7Z589 1322 aa11.05□□□□□ -0.64
TPM3-209ENST00000368527 VWA5AO00534 786 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 SART1O43290 800 aaKnown RBP11.04□□□□□ -0.64
TPM3-209ENST00000368527 ZEB2O60315 1214 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 GLI1P08151 1106 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 BACE1P56817 501 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 PTENP60484 403 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 SLC7A5Q01650 507 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 EN1Q05925 392 aaPredicted RBP11.04□□□□□ -0.64
TPM3-209ENST00000368527 PLS1Q14651 629 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 COG2Q14746 738 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 NBPF9Q3BBW0 867 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 FAM71AQ8IYT1 594 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 HDAC7Q8WUI4 952 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 IFT81Q8WYA0 676 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 FBXL18Q96ME1 805 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 NT5C1BQ96P26 610 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 GPR88Q9GZN0 384 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 RPAP3Q9H6T3 665 aaPredicted RBP11.04□□□□□ -0.64
TPM3-209ENST00000368527 RAVER2Q9HCJ3 691 aaKnown RBP11.04□□□□□ -0.64
TPM3-209ENST00000368527 UBE2TQ9NPD8 197 aaPredicted RBP11.04□□□□□ -0.64
TPM3-209ENST00000368527 KMT5AQ9NQR1 393 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 RNF146Q9NTX7 359 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 COL20A1Q9P218 1284 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 NFU1Q9UMS0 254 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 IGSF9BQ9UPX0 1349 aa11.04□□□□□ -0.64
TPM3-209ENST00000368527 DDX39AO00148 427 aaKnown RBP11.03□□□□□ -0.64
TPM3-209ENST00000368527 PODXLO00592 558 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 ZBTB39O15060 712 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 RAD51CO43502 376 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 BUB1BO60566 1050 aaPredicted RBP11.03□□□□□ -0.64
TPM3-209ENST00000368527 PHACTR2O75167 634 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 CAPN15O75808 1086 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 TRIM49P0CI25 452 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 TRIM49CP0CI26 452 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 ZBTB48P10074 688 aaPredicted RBP11.03□□□□□ -0.64
TPM3-209ENST00000368527 MYBL1P10243 752 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 TAL1P17542 331 aaPredicted RBP11.03□□□□□ -0.64
TPM3-209ENST00000368527 EIF2AK2P19525 551 aaKnown RBP11.03□□□□□ -0.64
TPM3-209ENST00000368527 POLD1P28340 1107 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 CHRNA3P32297 505 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 CARSP49589 748 aaKnown RBP11.03□□□□□ -0.64
TPM3-209ENST00000368527 PEX3P56589 373 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 HLTFQ14527 1009 aaKnown RBP eCLIP11.03□□□□□ -0.64
TPM3-209ENST00000368527 SNRNP35Q16560 246 aaKnown RBP11.03□□□□□ -0.64
TPM3-209ENST00000368527 PHLDB3Q6NSJ2 640 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 MIS18BP1Q6P0N0 1132 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 KDM7AQ6ZMT4 941 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 CPXCR1Q8N123 301 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 ZNF280CQ8ND82 737 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 TMEM161BQ8NDZ6 487 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 FBXL13Q8NEE6 735 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 CASKIN2Q8WXE0 1202 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 SHC3Q92529 594 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 MFSD14AQ96MC6 490 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 TAAR1Q96RJ0 339 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 CAPS2Q9BXY5 557 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 HOXC10Q9NYD6 342 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 MTUS1Q9ULD2 1270 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 ADAMTS5Q9UNA0 930 aa11.03□□□□□ -0.64
TPM3-209ENST00000368527 COL4A5P29400 1685 aa11.02□□□□□ -0.64
TPM3-209ENST00000368527 FOXN3O00409 490 aaPredicted RBP11.02□□□□□ -0.65
TPM3-209ENST00000368527 BACH1O14867 736 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms