RNA–Protein interactions for RNA: ENST00000368258.7

CCT3-203, Transcript of chaperonin containing TCP1 subunit 3, humanhuman

TSL 2

Gene CCT3, Length 1,885 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT3-203ENST00000368258 PDLIM1O00151 329 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 TDP2O95551 362 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 NTSR2O95665 410 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 PCK1P35558 622 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 RASSF2P50749 326 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 POLGP54098 1239 aaPredicted RBP13.2□□□□□ -0.3
CCT3-203ENST00000368258 RAD23BP54727 409 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 EN1Q05925 392 aaPredicted RBP13.2□□□□□ -0.3
CCT3-203ENST00000368258 PRPF4BQ13523 1007 aaKnown RBP13.2□□□□□ -0.3
CCT3-203ENST00000368258 ECM1Q16610 540 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 KNOP1Q1ED39 458 aaKnown RBP13.2□□□□□ -0.3
CCT3-203ENST00000368258 HERC4Q5GLZ8 1057 aaPredicted RBP13.2□□□□□ -0.3
CCT3-203ENST00000368258 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 UBL4BQ8N7F7 174 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 ALG3Q92685 438 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 SLC35C1Q96A29 364 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 FAM136AQ96C01 138 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 C18orf8Q96DM3 657 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 SLC4A9Q96Q91 983 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 TGS1Q96RS0 853 aaKnown RBP13.2□□□□□ -0.3
CCT3-203ENST00000368258 RPS6KC1Q96S38 1066 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 STK33Q9BYT3 514 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 RIOX1Q9H6W3 641 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 TLE6Q9H808 572 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 KANSL2Q9H9L4 492 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 CTTNBP2NLQ9P2B4 639 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 BIN2Q9UBW5 565 aaPredicted RBP13.2□□□□□ -0.3
CCT3-203ENST00000368258 NKX1-2Q9UD57 310 aaPredicted RBP13.2□□□□□ -0.3
CCT3-203ENST00000368258 GGT7Q9UJ14 662 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 USP20Q9Y2K6 914 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 FRMPD4Q14CM0 1322 aa13.2□□□□□ -0.3
CCT3-203ENST00000368258 PLA2G4BP0C869 781 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 KRT13P13646 458 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 CYP11B2P19099 503 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 RPL13P26373 211 aaKnown RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 SLCO1A2P46721 670 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 NOVP48745 357 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 ADCY7P51828 1080 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 SETDB1Q15047 1291 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 CCDC137Q6PK04 289 aaKnown RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 INTS8Q75QN2 995 aaKnown RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 FAM13CQ8NE31 585 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 DTNBP1Q96EV8 351 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 CAMKK2Q96RR4 588 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 CCDC113Q9H0I3 377 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 MKNK2Q9HBH9 465 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 ZNF287Q9HBT7 754 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 AJAP1Q9UKB5 411 aaPredicted RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 TRIM33Q9UPN9 1127 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 USH1CQ9Y6N9 552 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 KAT6BQ8WYB5 2073 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 USP17L3A6NCW0 530 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 USP17L4A6NCW7 530 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 DCTN3O75935 186 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 USP17L8P0C7I0 530 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 SP100P23497 879 aaPredicted RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 LRRC14Q15048 493 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 NFIL3Q16649 462 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 UBAP2Q5T6F2 1119 aaKnown RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 TTC27Q6P3X3 843 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 RHBDF2Q6PJF5 856 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 USP17L1Q7RTZ2 530 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 GPBP1Q86WP2 473 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 DNAAF5Q86Y56 855 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 RBBP8NLQ8NC74 664 aaPredicted RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 KCNV2Q8TDN2 545 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 DNAJC9Q8WXX5 260 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 SYT15Q9BQS2 421 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 ZSWIM1Q9BR11 485 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 CDC42EP4Q9H3Q1 356 aaKnown RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 DCLRE1BQ9H816 532 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 TYW1Q9NV66 732 aaKnown RBP13.19□□□□□ -0.3
CCT3-203ENST00000368258 TMEM260Q9NX78 707 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 RGL1Q9NZL6 768 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 GCNT4Q9P109 453 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 LRCH1Q9Y2L9 728 aa13.19□□□□□ -0.3
CCT3-203ENST00000368258 IGSF9BQ9UPX0 1349 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 MTA2O94776 668 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 TAC1P20366 129 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 RFX1P22670 979 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 STX2P32856 288 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 COILP38432 576 aaPredicted RBP13.18□□□□□ -0.3
CCT3-203ENST00000368258 SLC18A1P54219 525 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 DYNC1I2Q13409 638 aaKnown RBP13.18□□□□□ -0.3
CCT3-203ENST00000368258 SDCCAG8Q86SQ7 713 aaPredicted RBP13.18□□□□□ -0.3
CCT3-203ENST00000368258 SBF2Q86WG5 1849 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 RIBC1Q8N443 379 aaPredicted RBP13.18□□□□□ -0.3
CCT3-203ENST00000368258 SNED1Q8TER0 1413 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 HAS1Q92839 578 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 NUDCD1Q96RS6 583 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 NKIRAS1Q9NYS0 192 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 MTUS1Q9ULD2 1270 aa13.18□□□□□ -0.3
CCT3-203ENST00000368258 DDX60LQ5H9U9 1706 aaKnown RBP13.17□□□□□ -0.3
CCT3-203ENST00000368258 SPDYE5A6NIY4 337 aa13.17□□□□□ -0.3
CCT3-203ENST00000368258 BRAFP15056 766 aa13.17□□□□□ -0.3
CCT3-203ENST00000368258 RASA1P20936 1047 aa13.17□□□□□ -0.3
CCT3-203ENST00000368258 COPB2P35606 906 aa13.17□□□□□ -0.3
CCT3-203ENST00000368258 OCRLQ01968 901 aa13.17□□□□□ -0.3
CCT3-203ENST00000368258 CAV1Q03135 178 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms