RNA–Protein interactions for RNA: ENST00000368226.8

PTPRK-207, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPRK, Length 6,087 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-207ENST00000368226 ZNF280CQ8ND82 737 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 C1orf54Q8WWF1 131 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 EPC1Q9H2F5 836 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 SP110Q9HB58 689 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ASB14A6NK59 587 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 HSPA4LO95757 839 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 POU5F1BQ06416 359 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 MXD4Q14582 209 aaPredicted RBP13.74□□□□□ -0.21
PTPRK-207ENST00000368226 KLC3Q6P597 504 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 DHX40Q8IX18 779 aaKnown RBP13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ZNF34Q8IZ26 560 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ADAM33Q9BZ11 813 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 VCX3AQ9NNX9 186 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 BCORL1Q5H9F3 1711 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 PNPLA7Q6ZV29 1317 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 KCNA4P22459 653 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 SLC30A5Q8TAD4 765 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 A0A0G2JND7 137 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 IQANK1A0A1B0GTG1 560 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 USP27XA6NNY8 438 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 CALB1P05937 261 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 DRP2Q13474 957 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ART3Q13508 389 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 E2F5Q15329 346 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 CCDC144BQ3MJ40 725 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 LCA5Q86VQ0 697 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 LRRC71Q8N4P6 559 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 PDCD7Q8N8D1 485 aaKnown RBP13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ACAP3Q96P50 834 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 PVALEFA0A1B0GWK0 134 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 CCDC78A2IDD5 438 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 SPECC1L-ADORA2AF8WAN1 911 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ZNF543Q08ER8 600 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ELMSAN1Q6PJG2 1045 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 PROM2Q8N271 834 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 AGBL1Q96MI9 1066 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 ABCA6Q8N139 1617 aa13.74□□□□□ -0.21
PTPRK-207ENST00000368226 PPFIA2O75334 1257 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 ESRRBO95718 433 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 PDGFRBP09619 1106 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 CASP8Q14790 479 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 CRAMP1Q96RY5 1269 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 TTC26A0AVF1 554 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 TRPA1O75762 1119 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 ATP2C1P98194 919 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 WDR72Q3MJ13 1102 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 FAM47EQ6ZV65 393 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 RBM41Q96IZ5 413 aaKnown RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 MYOZ2Q9NPC6 264 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 GTSE1Q9NYZ3 720 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 IRF1P10914 325 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 HSPA6P17066 643 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 NR1D1P20393 614 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 RASSF3Q86WH2 238 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 DDX47Q9H0S4 455 aaKnown RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 KPNA2P52292 529 aaKnown RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 CPA5Q8WXQ8 436 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 PRR12Q9ULL5 1215 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 AGAP1Q9UPQ3 857 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 CROCC2H7BZ55 1655 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 CELF2O95319 508 aaKnown RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 PAMP19021 973 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 GPS1Q13098 491 aa13.73□□□□□ -0.21
PTPRK-207ENST00000368226 TRMT10CQ7L0Y3 403 aaKnown RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 BZW1Q7L1Q6 419 aaKnown RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 ZKSCAN4Q969J2 545 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 EPB41L4AQ9HCS5 686 aaPredicted RBP13.73□□□□□ -0.21
PTPRK-207ENST00000368226 UBA6A0AVT1 1052 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 NTSR2O95665 410 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 ATICP31939 592 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 USP11P51784 963 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 ARL4CP56559 192 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 TMPRSS15P98073 1019 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 ZC2HC1CQ53FD0 456 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 BTBD8Q5XKL5 378 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 TRIM42Q8IWZ5 723 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 ANLNQ9NQW6 1124 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 KCNH4Q9UQ05 1017 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 WDR19Q8NEZ3 1342 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 SNX2O60749 519 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 TBXAS1P24557 533 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 EPHA7Q15375 998 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 TAF1BQ53T94 588 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 TAS2R42Q7RTR8 314 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 DEFB132Q7Z7B7 95 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 AGR3Q8TD06 166 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 SNX9Q9Y5X1 595 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 NUGGCQ68CJ6 796 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 REEP2Q9BRK0 252 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 KRT82Q9NSB4 513 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 SUGT1Q9Y2Z0 365 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 COPEO14579 308 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 NUMBP49757 651 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 KCNA1Q09470 495 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 SNAPC2Q13487 334 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 MTF1Q14872 753 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 HEATR6Q6AI08 1181 aaKnown RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 CDR2LQ86X02 465 aaPredicted RBP13.72□□□□□ -0.21
PTPRK-207ENST00000368226 NDUFAF2Q8N183 169 aa13.72□□□□□ -0.21
PTPRK-207ENST00000368226 PPM1NQ8N819 430 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms