RNA–Protein interactions for RNA: ENST00000368213.9

PTPRK-205, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,816 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-205ENST00000368213 RPLP2P05387 115 aaKnown RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 CUL4AQ13619 759 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 CCDC13Q8IYE1 715 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 ZNF579Q8NAF0 562 aaKnown RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 RILPQ96NA2 401 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 FSD1LQ9BXM9 530 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 SLIT1O75093 1534 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 AKR1A1P14550 325 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 IGFBP4P22692 258 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 RBL2Q08999 1139 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 KRT71Q3SY84 523 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 SV2CQ496J9 727 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 RIT2Q99578 217 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 SAMSN1Q9NSI8 373 aaKnown RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 KLHL8Q9P2G9 620 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 IKBKBO14920 756 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 INHBAP08476 426 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 PSMC1P62191 440 aaKnown RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 MTG1Q9BT17 334 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 RTFDC1Q9BY42 306 aaPredicted RBP11.5□□□□□ -0.57
PTPRK-205ENST00000368213 PCDHB12Q9Y5F1 795 aa11.5□□□□□ -0.57
PTPRK-205ENST00000368213 PXDNLA1KZ92 1463 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 GUCY2FP51841 1108 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 ACTR2P61160 394 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 NUDCD1Q96RS6 583 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 HMBSP08397 361 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 ACOT2P49753 483 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 C3orf67Q6ZVT6 689 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 KRT222Q8N1A0 295 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 CHAMP1Q96JM3 812 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 HINFPQ9BQA5 517 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 EHD4Q9H223 541 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 TMX2Q9Y320 296 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 ADCY3O60266 1144 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 NMT1P30419 496 aaKnown RBP11.49□□□□□ -0.57
PTPRK-205ENST00000368213 RFX5P48382 616 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-205ENST00000368213 PDIA5Q14554 519 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 ZNF484Q5JVG2 852 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 C10orf76Q5T2E6 689 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 RPUSD2Q8IZ73 545 aaKnown RBP11.49□□□□□ -0.57
PTPRK-205ENST00000368213 ANKRD42Q8N9B4 389 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 HTATIP2Q9BUP3 242 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 ASCC2Q9H1I8 757 aaPredicted RBP11.49□□□□□ -0.57
PTPRK-205ENST00000368213 DOLKQ9UPQ8 538 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 PPP2R2CQ9Y2T4 447 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 URODP06132 367 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 GUCY1A2P33402 732 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 TCP11X2Q5H9J9 407 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 ENOX1Q8TC92 643 aaKnown RBP11.49□□□□□ -0.57
PTPRK-205ENST00000368213 C11orf70Q9BRQ4 267 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 FAM8A1Q9UBU6 413 aa11.49□□□□□ -0.57
PTPRK-205ENST00000368213 RGS16O15492 202 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 PCSK1P29120 753 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 EIF4A3P38919 411 aaKnown RBP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 CYP4A22Q5TCH4 519 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 DYNC1I1O14576 645 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 PLS3P13797 630 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 PPARDQ03181 441 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 NAALADL2Q58DX5 795 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 SENP6Q9GZR1 1112 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 CNOT8Q9UFF9 292 aaKnown RBP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 PI4K2BG5E9Z4 385 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 PPFIA4O75335 1185 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 ADORA2AP29274 412 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 DSG3P32926 999 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 GKAP1Q5VSY0 366 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 MGARPQ8TDB4 240 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 INTS2Q9H0H0 1204 aaKnown RBP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 FZD1Q9UP38 647 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 NPHP3-ACAD11A0A0J9YXS1 232 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 H7C4K7 107 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 ZC3H11AO75152 810 aaKnown RBP eCLIP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 IL18RAPO95256 599 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 PDGFRBP09619 1106 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 ZBED6P86452 979 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 PPIL2Q13356 520 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 DACT2Q5SW24 774 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 RDM1Q8NG50 284 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 CASP1P29466 404 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 KCNH2Q12809 1159 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 VGLL4Q14135 290 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 WHAMMP3Q1A5X7 153 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 FAM102AQ5T9C2 384 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 ZNF467Q7Z7K2 595 aaPredicted RBP11.48□□□□□ -0.57
PTPRK-205ENST00000368213 FBXL13Q8NEE6 735 aa11.48□□□□□ -0.57
PTPRK-205ENST00000368213 PAMP19021 973 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 CCDC62Q6P9F0 684 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 P2RX7Q99572 595 aaKnown RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ANAPC7Q9UJX3 599 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TLK1Q9UKI8 766 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TMEM131LA2VDJ0 1609 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ECEL1O95672 775 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 CTNNA1P35221 906 aaKnown RBP11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TTC23LQ6PF05 361 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 TMC7Q7Z402 723 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 LRRC4BQ9NT99 713 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 LCMT1Q9UIC8 334 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 MSRAQ9UJ68 235 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 EMSYQ7Z589 1322 aa11.47□□□□□ -0.57
PTPRK-205ENST00000368213 ZNF235Q14590 738 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms