RNA–Protein interactions for RNA: ENST00000368205.7

PTPRK-202, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 662 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-202ENST00000368205 HNRNPA0Q13151 305 aaKnown RBP5.87□□□□□ -1.47
PTPRK-202ENST00000368205 VPS72Q15906 364 aa5.87□□□□□ -1.47
PTPRK-202ENST00000368205 HECTD2Q5U5R9 776 aa5.87□□□□□ -1.47
PTPRK-202ENST00000368205 DOK3Q7L591 496 aa5.87□□□□□ -1.47
PTPRK-202ENST00000368205 FAM83AQ86UY5 434 aa5.87□□□□□ -1.47
PTPRK-202ENST00000368205 RTF1Q92541 710 aaKnown RBP5.87□□□□□ -1.47
PTPRK-202ENST00000368205 CPPED1Q9BRF8 314 aaPredicted RBP5.87□□□□□ -1.47
PTPRK-202ENST00000368205 RIOX1Q9H6W3 641 aa5.87□□□□□ -1.47
PTPRK-202ENST00000368205 ZMAT4Q9H898 229 aa5.87□□□□□ -1.47
PTPRK-202ENST00000368205 OXSMQ9NWU1 459 aa5.87□□□□□ -1.47
PTPRK-202ENST00000368205 ZNHIT2Q9UHR6 403 aa5.87□□□□□ -1.47
PTPRK-202ENST00000368205 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.87□□□□□ -1.47
PTPRK-202ENST00000368205 MYPNQ86TC9 1320 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 ZAR1LA6NP61 321 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 DNAJC6O75061 913 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 MRPL49Q13405 166 aaKnown RBP5.86□□□□□ -1.47
PTPRK-202ENST00000368205 LRRC32Q14392 662 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 KIF18BQ86Y91 864 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 FAM193BQ96PV7 902 aaPredicted RBP5.86□□□□□ -1.47
PTPRK-202ENST00000368205 NDC1Q9BTX1 674 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 LSM14BQ9BX40 385 aaKnown RBP5.86□□□□□ -1.47
PTPRK-202ENST00000368205 CPEB1Q9BZB8 566 aaKnown RBP5.86□□□□□ -1.47
PTPRK-202ENST00000368205 ZNF768Q9H5H4 540 aaKnown RBP5.86□□□□□ -1.47
PTPRK-202ENST00000368205 TOMM22Q9NS69 142 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 USP36Q9P275 1121 aaKnown RBP5.86□□□□□ -1.47
PTPRK-202ENST00000368205 PTGFRNQ9P2B2 879 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 EIF2B4Q9UI10 523 aaKnown RBP5.86□□□□□ -1.47
PTPRK-202ENST00000368205 PCDHB6Q9Y5E3 794 aa5.86□□□□□ -1.47
PTPRK-202ENST00000368205 CENPVL1A0A0U1RR11 272 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 TMEM200CA6NKL6 621 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 RFPL3O75679 317 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 SEC24DO94855 1032 aaPredicted RBP5.85□□□□□ -1.47
PTPRK-202ENST00000368205 CFBP00751 764 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 SDSP20132 328 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 CD40P25942 277 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 CD69Q07108 199 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 SQSTM1Q13501 440 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 CFAP100Q494V2 611 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 Q6YL49 198 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 CDYL2Q8N8U2 506 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 BEND2Q8NDZ0 799 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 PMFBP1Q8TBY8 1022 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 IL17RAQ96F46 866 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 DCLRE1CQ96SD1 692 aaKnown RBP5.85□□□□□ -1.47
PTPRK-202ENST00000368205 SYNPO2LQ9H987 977 aa5.85□□□□□ -1.47
PTPRK-202ENST00000368205 SLTMQ9NWH9 1034 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTPRK-202ENST00000368205 ELL2O00472 640 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-202ENST00000368205 LY86O95711 162 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 ATP2A2P16615 1042 aaKnown RBP5.84□□□□□ -1.47
PTPRK-202ENST00000368205 ZEB1P37275 1124 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-202ENST00000368205 CASRP41180 1078 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 OLFML1Q6UWY5 402 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 TAS1R1Q7RTX1 841 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 LILRA3Q8N6C8 439 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-202ENST00000368205 EFHBQ8N7U6 833 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 OR5M3Q8NGP4 307 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 NTN5Q8WTR8 489 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-202ENST00000368205 BBC3Q96PG8 261 aaPredicted RBP5.84□□□□□ -1.47
PTPRK-202ENST00000368205 OSBPL2Q9H1P3 480 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 EPC1Q9H2F5 836 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 CYP4F11Q9HBI6 524 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 INTS7Q9NVH2 962 aaKnown RBP5.84□□□□□ -1.47
PTPRK-202ENST00000368205 PODXL2Q9NZ53 605 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 CLCA2Q9UQC9 943 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 ZKSCAN5Q9Y2L8 839 aa5.84□□□□□ -1.47
PTPRK-202ENST00000368205 GAGE12BA1L429 117 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 GAGE12HA6NDE8 117 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 PCDH8O95206 1070 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 PFKMP08237 780 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 APOBEC3AP31941 199 aaPredicted RBP5.83□□□□□ -1.48
PTPRK-202ENST00000368205 IL12RB1P42701 662 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 GPR15P49685 360 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 GZMKP49863 264 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 FAM189BP81408 668 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 MRPS21P82921 87 aaKnown RBP5.83□□□□□ -1.48
PTPRK-202ENST00000368205 NFE2L2Q16236 605 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 CCDC178Q5BJE1 867 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 LRCH2Q5VUJ6 765 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 GPRIN1Q7Z2K8 1008 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 ARHGEF19Q8IW93 802 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 SERHL2Q9H4I8 314 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 H2AFY2Q9P0M6 372 aaPredicted RBP5.83□□□□□ -1.48
PTPRK-202ENST00000368205 MAGEC2Q9UBF1 373 aaPredicted RBP5.83□□□□□ -1.48
PTPRK-202ENST00000368205 CDK11AQ9UQ88 783 aaPredicted RBP5.83□□□□□ -1.48
PTPRK-202ENST00000368205 CHST2Q9Y4C5 530 aa5.83□□□□□ -1.48
PTPRK-202ENST00000368205 RNASET2O00584 256 aaKnown RBP5.82□□□□□ -1.48
PTPRK-202ENST00000368205 LPXNO60711 386 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 F2P00734 622 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 PTTG1IPP53801 180 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 DSG1Q02413 1049 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 SF3A1Q15459 793 aaKnown RBP5.82□□□□□ -1.48
PTPRK-202ENST00000368205 STRIP1Q5VSL9 837 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 SYCE2Q6PIF2 218 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 ESPNLQ6ZVH7 1005 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 GDF7Q7Z4P5 450 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 ADGRG3Q86Y34 549 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 FDXACB1Q9BRP7 624 aaPredicted RBP5.82□□□□□ -1.48
PTPRK-202ENST00000368205 DKK2Q9UBU2 259 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 HDAC5Q9UQL6 1122 aa5.82□□□□□ -1.48
PTPRK-202ENST00000368205 ST20-MTHFSA0A0A6YYL1 179 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms