RNA–Protein interactions for RNA: ENST00000367740.2

VAMP4-202, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VAMP4, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-202ENST00000367740 RAB23Q9ULC3 237 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 CEP131Q9UPN4 1083 aa16.61■□□□□ 0.25
VAMP4-202ENST00000367740 LAMA1P25391 3075 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 DHX15O43143 795 aaKnown RBP16.6■□□□□ 0.25
VAMP4-202ENST00000367740 RETP07949 1114 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 RPS9P46781 194 aaKnown RBP16.6■□□□□ 0.25
VAMP4-202ENST00000367740 TRDNQ13061 729 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 ZBTB41Q5SVQ8 909 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 TAS1R1Q7RTX1 841 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 CMTR1Q8N1G2 835 aaKnown RBP16.6■□□□□ 0.25
VAMP4-202ENST00000367740 SRBD1Q8N5C6 995 aaKnown RBP16.6■□□□□ 0.25
VAMP4-202ENST00000367740 CTCFLQ8NI51 663 aaPredicted RBP16.6■□□□□ 0.25
VAMP4-202ENST00000367740 HDAC7Q8WUI4 952 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 PHKBQ93100 1093 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 SCLT1Q96NL6 688 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 MAP3K14Q99558 947 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 IL25Q9H293 177 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 CHST12Q9NRB3 414 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 MARCH5Q9NX47 278 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 ZDHHC7Q9NXF8 308 aa16.6■□□□□ 0.25
VAMP4-202ENST00000367740 ZFP37Q9Y6Q3 630 aaPredicted RBP16.6■□□□□ 0.25
VAMP4-202ENST00000367740 hCG_1642624A0A1W2PR95 340 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 TMOD1P28289 359 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 AFF1P51825 1210 aaKnown RBP16.59■□□□□ 0.25
VAMP4-202ENST00000367740 MTAPQ13126 283 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 FZD5Q13467 585 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 TWF2Q6IBS0 349 aaKnown RBP16.59■□□□□ 0.25
VAMP4-202ENST00000367740 RNF168Q8IYW5 571 aaPredicted RBP16.59■□□□□ 0.25
VAMP4-202ENST00000367740 ZNF654Q8IZM8 581 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 NLRP7Q8WX94 980 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 DDX1Q92499 740 aaKnown RBP16.59■□□□□ 0.25
VAMP4-202ENST00000367740 TMEM175Q9BSA9 504 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 PRKD2Q9BZL6 878 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 RXFP1Q9HBX9 757 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 FAM105AQ9NUU6 356 aa16.59■□□□□ 0.25
VAMP4-202ENST00000367740 GREB1Q4ZG55 1949 aa16.58■□□□□ 0.25
VAMP4-202ENST00000367740 GCN1Q92616 2671 aaKnown RBP16.58■□□□□ 0.25
VAMP4-202ENST00000367740 NRP1O14786 923 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 EFEMP2O95967 443 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 FSHRP23945 695 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 ANTXR2P58335 489 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 SART3Q15020 963 aaKnown RBP16.58■□□□□ 0.24
VAMP4-202ENST00000367740 CSRP2Q16527 193 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 TPRG1Q6ZUI0 275 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 SPDYE1Q8NFV5 336 aaPredicted RBP16.58■□□□□ 0.24
VAMP4-202ENST00000367740 PLEKHA4Q9H4M7 779 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 FAM217BQ9NTX9 383 aaPredicted RBP16.58■□□□□ 0.24
VAMP4-202ENST00000367740 CDH7Q9ULB5 785 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 PIN4Q9Y237 131 aaKnown RBP16.58■□□□□ 0.24
VAMP4-202ENST00000367740 SSX2IPQ9Y2D8 614 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 FAN1Q9Y2M0 1017 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 TAF6LQ9Y6J9 622 aa16.58■□□□□ 0.24
VAMP4-202ENST00000367740 COL4A2P08572 1712 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 TGM5O43548 720 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 ZNF623O75123 536 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 DDAH1O94760 285 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 SKIP12755 728 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 GLUD2P49448 558 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 PFKPQ01813 784 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 AGMOQ6ZNB7 445 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 PALB2Q86YC2 1186 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 CELF5Q8N6W0 485 aaKnown RBP16.57■□□□□ 0.24
VAMP4-202ENST00000367740 URGCPQ8TCY9 931 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 IGDCC4Q8TDY8 1250 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 LZTS2Q9BRK4 669 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 ANO3Q9BYT9 981 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 ZMIZ1Q9ULJ6 1067 aa16.57■□□□□ 0.24
VAMP4-202ENST00000367740 DSPP15924 2871 aaKnown RBP16.57■□□□□ 0.24
VAMP4-202ENST00000367740 TDRD15B5MCY1 1934 aaKnown RBP16.57■□□□□ 0.24
VAMP4-202ENST00000367740 SHISA7A6NL88 538 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 ALDH2P05091 517 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 CYP21A2P08686 494 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 SREBF1P36956 1147 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 RAB27AP51159 221 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 DRP2Q13474 957 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 PRR23BQ6ZRT6 265 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 MTSS1LQ765P7 747 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 NIPA1Q7RTP0 329 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 HEATR3Q7Z4Q2 680 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 GABBR1Q9UBS5 961 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 PRG3Q9Y2Y8 225 aaPredicted RBP16.56■□□□□ 0.24
VAMP4-202ENST00000367740 NOTCH4Q99466 2003 aa16.56■□□□□ 0.24
VAMP4-202ENST00000367740 AKAP13Q12802 2813 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 IGLV3-22A0A075B6J6 115 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 C1QTNF9BB2RNN3 333 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 FAM86B1E9PN63 330 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 IPO5O00410 1097 aaKnown RBP16.55■□□□□ 0.24
VAMP4-202ENST00000367740 NCAM2O15394 837 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 GAS2O43903 313 aaKnown RBP16.55■□□□□ 0.24
VAMP4-202ENST00000367740 C1RP00736 705 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 FAM86B2P0C5J1 330 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 C1QTNF9P0C862 333 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 SFPQP23246 707 aaKnown RBP eCLIP16.55■□□□□ 0.24
VAMP4-202ENST00000367740 NRLP54845 237 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 NTHL1P78549 312 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 DSG1Q02413 1049 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 IL31Q6EBC2 164 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 TYW1BQ6NUM6 668 aa16.55■□□□□ 0.24
VAMP4-202ENST00000367740 ZNF746Q6NUN9 644 aaPredicted RBP16.55■□□□□ 0.24
VAMP4-202ENST00000367740 GRASPQ7Z6J2 395 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms