RNA–Protein interactions for RNA: ENST00000367256.9

SYNE1-208, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 10,742 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-208ENST00000367256 SYDE2Q5VT97 1194 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ITPRIPL1Q6GPH6 555 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 MAML3Q96JK9 1138 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 BLOC1S6Q9UL45 172 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 BTNL9Q6UXG8 535 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 FAM210AQ96ND0 272 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 LGR6Q9HBX8 967 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 MLXIPLQ9NP71 852 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ADGRL3Q9HAR2 1447 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 CFAP69A5D8W1 941 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 PLA2G4BP0C869 781 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 VCPP55072 806 aaKnown RBP7.75□□□□□ -1.17
SYNE1-208ENST00000367256 CHRNDQ07001 517 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 BYSLQ13895 437 aaKnown RBP7.75□□□□□ -1.17
SYNE1-208ENST00000367256 KRT72Q14CN4 511 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 SLFN12LQ6IEE8 588 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 TTC39CQ8N584 583 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 CASS4Q9NQ75 786 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 DIABLOQ9NR28 239 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 PKD2L2Q9NZM6 624 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 AURKCQ9UQB9 309 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 SPDYE5A6NIY4 337 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 SLC26A4O43511 780 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 SPDYE7PQ495Y7 208 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 DAB2IPQ5VWQ8 1189 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ANKS3Q6ZW76 656 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 PASD1Q8IV76 773 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ZBED8Q8IZ13 594 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ATP11CQ8NB49 1132 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 TRIM8Q9BZR9 551 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 NFKBIL1Q9UBC1 381 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ETNK1Q9HBU6 452 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ASNSD1Q9NWL6 643 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 CEP170Q5SW79 1584 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 C5orf58C9J3I9 102 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 SEC24DO94855 1032 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-208ENST00000367256 AGTP01019 485 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ALDH18A1P54886 795 aaKnown RBP7.75□□□□□ -1.17
SYNE1-208ENST00000367256 UNC13DQ70J99 1090 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 SH3KBP1Q96B97 665 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 WNT8AQ9H1J5 351 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 VPS11Q9H270 941 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 MPP6Q9NZW5 540 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 HEY1Q9Y5J3 304 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 ZNF804BA4D1E1 1349 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 LZTS3O60299 673 aaPredicted RBP7.75□□□□□ -1.17
SYNE1-208ENST00000367256 KRT16P08779 473 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 DDX5P17844 614 aaKnown RBP7.75□□□□□ -1.17
SYNE1-208ENST00000367256 DNAL1Q4LDG9 190 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 FASTKD1Q53R41 847 aaKnown RBP7.75□□□□□ -1.17
SYNE1-208ENST00000367256 TRAF7Q6Q0C0 670 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 TRIM72Q6ZMU5 477 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 PBXIP1Q96AQ6 731 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 SH3GL2Q99962 352 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 EMILIN3Q9NT22 766 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 EHD2Q9NZN4 543 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 TSC22D4Q9Y3Q8 395 aa7.75□□□□□ -1.17
SYNE1-208ENST00000367256 SYNDIG1LA6NDD5 238 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 EIF4E1BA6NMX2 242 aaKnown RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 EIF3HO15372 352 aaKnown RBP eCLIP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 A1BGP04217 495 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 KCNA2P16389 499 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 FASTKD5Q7L8L6 764 aaKnown RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 ARL8AQ96BM9 186 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.74□□□□□ -1.173e-6■■□□□ 13.5
SYNE1-208ENST00000367256 PDP2Q9P2J9 529 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 TSR3Q9UJK0 312 aaKnown RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 ELF1P32519 619 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 JAK3P52333 1124 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 PMS2P54278 862 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 POU5F1BQ06416 359 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 GSPT2Q8IYD1 628 aaKnown RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 WWP1Q9H0M0 922 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 SAMSN1Q9NSI8 373 aaKnown RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 NCAPD2Q15021 1401 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 E7ENQ6 273 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 GDF11O95390 407 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 TFDP2Q14188 446 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 FAM98CQ17RN3 349 aaKnown RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 TBC1D9BQ66K14 1250 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 TAS2R42Q7RTR8 314 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 TMC4Q7Z404 712 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 AFG1LQ8WV93 481 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 PIGSQ96S52 555 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 NDUFA13Q9P0J0 144 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 ASAP2O43150 1006 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 PPP1R37O75864 691 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 SP110Q9HB58 689 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 NEMP1O14524 444 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 SUPT3HO75486 399 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 ADORA1P30542 326 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 AGBL2Q5U5Z8 902 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 ZNF467Q7Z7K2 595 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 BRIP1Q9BX63 1249 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 CXorf56Q9H5V9 222 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 RUBCNLQ9H714 662 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 SRGAP2O75044 1071 aa7.74□□□□□ -1.17
SYNE1-208ENST00000367256 CDH2P19022 906 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 HSPA9P38646 679 aaKnown RBP7.74□□□□□ -1.17
SYNE1-208ENST00000367256 AGBL1Q96MI9 1066 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 149.9 ms