RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 PPM1AP35813 382 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 PLCB3Q01970 1234 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 CTC1Q2NKJ3 1217 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 NOMO2Q5JPE7 1267 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 KRT79Q5XKE5 535 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 MRPL10Q7Z7H8 261 aaKnown RBP11.48□□□□□ -0.57
YBX3-203ENST00000366286 SLC39A11Q8N1S5 342 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 SMG8Q8ND04 991 aaKnown RBP11.48□□□□□ -0.57
YBX3-203ENST00000366286 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.48□□□□□ -0.57
YBX3-203ENST00000366286 RSPH1Q8WYR4 309 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 MRPS27Q92552 414 aaKnown RBP11.48□□□□□ -0.57
YBX3-203ENST00000366286 PPP2R3CQ969Q6 453 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 PGBD4Q96DM1 585 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 CCDC51Q96ER9 411 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 IGFLR1Q9H665 355 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 RSAD1Q9HA92 442 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 TBC1D13Q9NVG8 400 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 SPG21Q9NZD8 308 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 LZTS1Q9Y250 596 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 GTF3C3Q9Y5Q9 886 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 STK24Q9Y6E0 443 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 CNTNAP2Q9UHC6 1331 aa11.48□□□□□ -0.57
YBX3-203ENST00000366286 CITO14578 2027 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 PLXNA3P51805 1871 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 VWA3AA6NCI4 1184 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 NT5C1B-RDH14C9J2C7 533 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 E9PMD0 336 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 TNFRSF10AO00220 468 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 NCK2O43639 380 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 B4GALT3O60512 393 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 EYA4O95677 639 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 IL9P15248 144 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 LTBRP36941 435 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 NRIP1P48552 1158 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 AFF1P51825 1210 aaKnown RBP11.47□□□□□ -0.57
YBX3-203ENST00000366286 BCAR1P56945 870 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 ERVFC1P60507 584 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 RNASELQ05823 741 aaKnown RBP11.47□□□□□ -0.57
YBX3-203ENST00000366286 DLX2Q07687 328 aaPredicted RBP11.47□□□□□ -0.57
YBX3-203ENST00000366286 PLPP4Q5VZY2 271 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 PTCRAQ6ISU1 281 aaPredicted RBP11.47□□□□□ -0.57
YBX3-203ENST00000366286 PPP4R3CPQ6ZMV5 832 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 KCNK18Q7Z418 384 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 BRAPQ7Z569 592 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 TMEM173Q86WV6 379 aaPredicted RBP11.47□□□□□ -0.57
YBX3-203ENST00000366286 CDR2LQ86X02 465 aaPredicted RBP11.47□□□□□ -0.57
YBX3-203ENST00000366286 ZBTB8OSQ8IWT0 167 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 URGCPQ8TCY9 931 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 KIFC3Q9BVG8 833 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 GBP3Q9H0R5 595 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 CSRNP2Q9H175 543 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 NXF3Q9H4D5 531 aaKnown RBP11.47□□□□□ -0.57
YBX3-203ENST00000366286 NRDE2Q9H7Z3 1164 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 POLD4Q9HCU8 107 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 ENTPD7Q9NQZ7 604 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 PRMT7Q9NVM4 692 aaPredicted RBP11.47□□□□□ -0.57
YBX3-203ENST00000366286 HES2Q9Y543 173 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 IPPQ9Y573 584 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 CUL9Q8IWT3 2517 aa11.47□□□□□ -0.57
YBX3-203ENST00000366286 MUC3AQ02505 3323 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 C5orf42Q9H799 3197 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 K7ELQ4 463 aaPredicted RBP11.46□□□□□ -0.57
YBX3-203ENST00000366286 NPTXRO95502 500 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 GLP2RO95838 553 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 ITGA4P13612 1032 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 NAMPTP43490 491 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 NDUFV1P49821 464 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 NCBP1Q09161 790 aaKnown RBP11.46□□□□□ -0.57
YBX3-203ENST00000366286 PPP2R5AQ15172 486 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 ZRSR1Q15695 479 aaKnown RBP11.46□□□□□ -0.57
YBX3-203ENST00000366286 CLUL1Q15846 466 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 FAM187BQ17R55 369 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 ARL6IP4Q66PJ3 421 aaKnown RBP11.46□□□□□ -0.57
YBX3-203ENST00000366286 SLC27A1Q6PCB7 646 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 RBM23Q86U06 439 aaKnown RBP11.46□□□□□ -0.57
YBX3-203ENST00000366286 EFHBQ8N7U6 833 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 CNNM3Q8NE01 707 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 DEPTORQ8TB45 409 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 MICAL1Q8TDZ2 1067 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 PRIMPOLQ96LW4 560 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 TCF25Q9BQ70 676 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 RUSC1Q9BVN2 902 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 APOL6Q9BWW8 343 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 TRIM6Q9C030 488 aaPredicted RBP11.46□□□□□ -0.57
YBX3-203ENST00000366286 CCDC113Q9H0I3 377 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 C2orf40Q9H1Z8 148 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 FOXD4L1Q9NU39 408 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 DNAJB4Q9UDY4 337 aa11.46□□□□□ -0.57
YBX3-203ENST00000366286 TTLL13PA6NNM8 815 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PER2O15055 1255 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 DDHD2O94830 711 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 EDN1P05305 212 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PRKCBP05771 671 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 GALTP07902 379 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 LIG1P18858 919 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 PDCP20941 246 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 MLH1P40692 756 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 SLC11A1P49279 550 aa11.45□□□□□ -0.58
YBX3-203ENST00000366286 ALDH7A1P49419 539 aaKnown RBP11.45□□□□□ -0.58
YBX3-203ENST00000366286 KRT17Q04695 432 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms