RNA–Protein interactions for RNA: ENST00000362061.3

CACNA1S-201, Transcript of calcium voltage-gated channel subunit alpha1 S, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CACNA1S, Length 6,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1S-201ENST00000362061 SRGAP2O75044 1071 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 IGSF3O75054 1194 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 HMBSP08397 361 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 STAG3L1P0CL83 205 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 FOXD4Q12950 439 aaPredicted RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 MGAT5BQ3V5L5 792 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 ARRDC4Q8NCT1 418 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 SCG3Q8WXD2 468 aaKnown RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 SH2D3AQ9BRG2 576 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 DHX35Q9H5Z1 703 aaKnown RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 IFNAR2P48551 515 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 ALDH7A1P49419 539 aaKnown RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 GNGT1P63211 74 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 KCNH2Q12809 1159 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 SNX17Q15036 470 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 TMCO4Q5TGY1 634 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 TTC13Q8NBP0 860 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 ATG4CQ96DT6 458 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 ERAP1Q9NZ08 941 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 RGL1Q9NZL6 768 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 AFF4Q9UHB7 1163 aaKnown RBP11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 TBK1Q9UHD2 729 aa11.27□□□□□ -0.61
CACNA1S-201ENST00000362061 WDR19Q8NEZ3 1342 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 ATN1P54259 1190 aaPredicted RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 RBP5P82980 135 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 LMBRD2Q68DH5 695 aaPredicted RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 SRRM1Q8IYB3 904 aaKnown RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 ACRBPQ8NEB7 543 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 ULK4Q96C45 1275 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 HEMGNQ9BXL5 484 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 SLC38A7Q9NVC3 462 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 G3BP2Q9UN86 482 aaKnown RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 EXOC1LA0A1B0GW35 172 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 DFFAO00273 331 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 DNAJC6O75061 913 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 NTSR2O95665 410 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 HSPA8P11142 646 aaKnown RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 AP1B1Q10567 949 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 KRT31Q15323 416 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 STKLD1Q8NE28 680 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 GPT2Q8TD30 523 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 PI4K2BG5E9Z4 385 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 SERPINB6P35237 376 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 THPOP40225 353 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 PLEKHH3Q7Z736 793 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 TUFT1Q9NNX1 390 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 USP31Q70CQ4 1352 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 CDC27P30260 824 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 IFNA8P32881 189 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 GPC5P78333 572 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 LAMC2Q13753 1193 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 TMEM132DQ14C87 1099 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 HABP4Q5JVS0 413 aaKnown RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 RESP18Q5W5W9 173 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 PHLDB3Q6NSJ2 640 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 DCP1BQ8IZD4 617 aaKnown RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 RAB42Q8N4Z0 105 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 EFHBQ8N7U6 833 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 SPDL1Q96EA4 605 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 TMEM169Q96HH4 297 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 INTS9Q9NV88 658 aaKnown RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 NDFIP2Q9NV92 336 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 C17orf102A2RUQ5 167 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 F5H423 210 aaPredicted RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 H3BRJ5 948 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 C2CD2LO14523 706 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 EYA4O95677 639 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 IRF1P10914 325 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 ALDH1A3P47895 512 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 OCRLQ01968 901 aa11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 DACT3Q96B18 629 aaPredicted RBP11.26□□□□□ -0.61
CACNA1S-201ENST00000362061 TET3O43151 1660 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 RRN3P2A6NIE6 340 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 POLRMTO00411 1230 aaKnown RBP11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 ARHGAP15Q53QZ3 475 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 HEATR6Q6AI08 1181 aaKnown RBP11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 ERO1BQ86YB8 467 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 ZBTB18Q99592 522 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 EGFL8Q99944 293 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 INTS2Q9H0H0 1204 aaKnown RBP11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 TRPV6Q9H1D0 765 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 USH1CQ9Y6N9 552 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 LRG1P02750 347 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 PRAMEP78395 509 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 DR1Q01658 176 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 ITPRIPL1Q6GPH6 555 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 GBP7Q8N8V2 638 aaPredicted RBP11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 MIPOL1Q8TD10 442 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 CDC23Q9UJX2 597 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 ATP11BQ9Y2G3 1177 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 TRIM49BA6NDI0 452 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 ASAP2O43150 1006 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 TMCC1O94876 653 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 CASP1P29466 404 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 HSD17B4P51659 736 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 NAALADL2Q58DX5 795 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 ACBD5Q5T8D3 534 aaPredicted RBP11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 TDRD7Q8NHU6 1098 aaKnown RBP11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 DCUN1D1Q96GG9 259 aa11.25□□□□□ -0.61
CACNA1S-201ENST00000362061 AP1M1Q9BXS5 423 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms