RNA–Protein interactions for RNA: ENST00000359867.7

CSNK1E-201, Transcript of casein kinase 1 epsilon, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSNK1E, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-201ENST00000359867 CACNB2Q08289 660 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 ODR4Q5SWX8 454 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 AFG1LQ8WV93 481 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 FAM207AQ9NSI2 230 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 EIF3CLB5ME19 914 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 TGFB1I1O43294 461 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 ATP8B1O43520 1251 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 HIP1RO75146 1068 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 PRKAR2AP13861 404 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 NMT1P30419 496 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 MAPK7Q13164 816 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 IRF5Q13568 498 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 IQSEC1Q6DN90 963 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 MIS18BP1Q6P0N0 1132 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 GOLGA5Q8TBA6 731 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 PCYT2Q99447 389 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 EIF3CQ99613 913 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 STRA6Q9BX79 667 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 NHEJ1Q9H9Q4 299 aaPredicted RBP15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 PDE11AQ9HCR9 933 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 LARSQ9P2J5 1176 aaKnown RBP15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 CEP83Q9Y592 693 aa15.11■□□□□ 0.01
CSNK1E-201ENST00000359867 DNAH12Q6ZR08 3092 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 MYH9P35579 1960 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 DYNC1LI2O43237 492 aaPredicted RBP15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 DKC1O60832 514 aaKnown RBP eCLIP15.1■□□□□ 0.014e-10■□□□□ 9.2
CSNK1E-201ENST00000359867 N4BP1O75113 896 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 EPB41P11171 864 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 YWHABP31946 246 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 KCNH2Q12809 1159 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 OR6J1Q8NGC5 347 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 SEPT1Q8WYJ6 367 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 MKNK1Q9BUB5 465 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 HAUS4Q9H6D7 363 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 POLD4Q9HCU8 107 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 CEP72Q9P209 647 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 PTCH2Q9Y6C5 1203 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 ATG7O95352 703 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 CCND3P30281 292 aaPredicted RBP15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 DAW1Q8N136 415 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 BAP1Q92560 729 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 SYN2Q92777 582 aaPredicted RBP15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 CDC23Q9UJX2 597 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 GNEQ9Y223 722 aaKnown RBP15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 JRKLQ9Y4A0 524 aa15.1■□□□□ 0.01
CSNK1E-201ENST00000359867 ZMYM2Q9UBW7 1377 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 EPHB6O15197 1021 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 PPP1R37O75864 691 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 IPO7O95373 1038 aaKnown RBP15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 GNRH1P01148 92 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 CCDC172P0C7W6 258 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 MARK3P27448 753 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 ARHGAP25P42331 645 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 LAMC2Q13753 1193 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 MYBPC2Q14324 1141 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 PLA2G4FQ68DD2 849 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 HS2ST1Q7LGA3 356 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 CACNA2D4Q7Z3S7 1137 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 TLK2Q86UE8 772 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 TXLNBQ8N3L3 684 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 ZNF302Q9NR11 478 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 VPS18Q9P253 973 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 ADAM21Q9UKJ8 722 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 REXO2Q9Y3B8 237 aaKnown RBP15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 AKAP3O75969 853 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 AFPP02771 609 aaKnown RBP15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 ATP4AP20648 1035 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 PRKCEQ02156 737 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 KCNA1Q09470 495 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 ZSCAN26Q16670 478 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 PDXDC1Q6P996 788 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 SLC17A8Q8NDX2 589 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 CCDC43Q96MW1 224 aaKnown RBP15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 ABCB6Q9NP58 842 aa15.09■□□□□ 0.01
CSNK1E-201ENST00000359867 IGSF9BQ9UPX0 1349 aa15.08■□□□□ 0.01
CSNK1E-201ENST00000359867 CCDC151A5D8V7 595 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 HMGCRP04035 888 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 ZNF286BP0CG31 522 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 AKR1A1P14550 325 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 PSMC2P35998 433 aaKnown RBP15.08■□□□□ 0
CSNK1E-201ENST00000359867 TUBB2AQ13885 445 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 ARHGEF6Q15052 776 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 ZC2HC1CQ53FD0 456 aaPredicted RBP15.08■□□□□ 0
CSNK1E-201ENST00000359867 RRAGAQ7L523 313 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 PACS2Q86VP3 889 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 CCDC155Q8N6L0 562 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 TMEM174Q8WUU8 243 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 GLG1Q92896 1179 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 ATP6V0A1Q93050 837 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 CCDC42Q96M95 316 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 TUBB2BQ9BVA1 445 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 GBP3Q9H0R5 595 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 ST6GALNAC4Q9H4F1 302 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 TRIM10Q9UDY6 481 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 IGKV6D-21A0A0A0MT36 114 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 PLS3P13797 630 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 NPEPPSP55786 919 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 ANO5Q75V66 913 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 SRLQ86TD4 932 aa15.08■□□□□ 0
CSNK1E-201ENST00000359867 SLC9A9Q8IVB4 645 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms