RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 MINDY3Q9H8M7 445 aa25.78■■□□□ 1.72
YIF1A-201ENST00000359461 SFXN1Q9H9B4 322 aa25.78■■□□□ 1.72
YIF1A-201ENST00000359461 DBR1Q9UK59 544 aaKnown RBP25.78■■□□□ 1.72
YIF1A-201ENST00000359461 LILRB3O75022 631 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 DDHD2O94830 711 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 P4HBP07237 508 aaKnown RBP25.77■■□□□ 1.72
YIF1A-201ENST00000359461 GCFC2P16383 781 aaKnown RBP25.77■■□□□ 1.72
YIF1A-201ENST00000359461 HOXA11P31270 313 aaPredicted RBP25.77■■□□□ 1.72
YIF1A-201ENST00000359461 RFC5P40937 340 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 LETM2Q2VYF4 491 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 UBXN11Q5T124 520 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 CABP7Q86V35 215 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 EXOC8Q8IYI6 725 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 TMEM105Q8N8V8 129 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 TMEM87AQ8NBN3 555 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 URGCPQ8TCY9 931 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 PSPC1Q8WXF1 523 aaKnown RBP25.77■■□□□ 1.72
YIF1A-201ENST00000359461 TMEM175Q9BSA9 504 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 RSAD1Q9HA92 442 aa25.77■■□□□ 1.72
YIF1A-201ENST00000359461 CLCN4P51793 760 aa25.76■■□□□ 1.71
YIF1A-201ENST00000359461 AFF1P51825 1210 aaKnown RBP25.76■■□□□ 1.71
YIF1A-201ENST00000359461 CPLX2Q6PUV4 134 aaKnown RBP25.76■■□□□ 1.71
YIF1A-201ENST00000359461 TMC5Q6UXY8 1006 aa25.76■■□□□ 1.71
YIF1A-201ENST00000359461 NEK8Q86SG6 692 aa25.76■■□□□ 1.71
YIF1A-201ENST00000359461 GPR149Q86SP6 731 aa25.76■■□□□ 1.71
YIF1A-201ENST00000359461 C4orf19Q8IY42 314 aa25.76■■□□□ 1.71
YIF1A-201ENST00000359461 PRPF31Q8WWY3 499 aaKnown RBP25.76■■□□□ 1.71
YIF1A-201ENST00000359461 ATOH1Q92858 354 aaPredicted RBP25.76■■□□□ 1.71
YIF1A-201ENST00000359461 CEP170P1Q96L14 293 aa25.76■■□□□ 1.71
YIF1A-201ENST00000359461 KCNJ14Q9UNX9 436 aa25.76■■□□□ 1.71
YIF1A-201ENST00000359461 MTCL1Q9Y4B5 1905 aaKnown RBP25.76■■□□□ 1.71
YIF1A-201ENST00000359461 PROB1E7EW31 1015 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 TBX3O15119 743 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 GAS2O43903 313 aaKnown RBP25.75■■□□□ 1.71
YIF1A-201ENST00000359461 GFRA3O60609 400 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 LAMTOR4Q0VGL1 99 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 HAS1Q92839 578 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 TMEM143Q96AN5 459 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 KLHL5Q96PQ7 755 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 LARP6Q9BRS8 491 aaKnown RBP25.75■■□□□ 1.71
YIF1A-201ENST00000359461 LXNQ9BS40 222 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 KANSL3Q9P2N6 904 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 LIMD1Q9UGP4 676 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 VPS13AQ96RL7 3174 aa25.75■■□□□ 1.71
YIF1A-201ENST00000359461 STK36Q9NRP7 1315 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 CCDC194A0A1B0GVG4 234 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 H0Y858 1186 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 INPPL1O15357 1258 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 CNPP09543 421 aaKnown RBP25.74■■□□□ 1.71
YIF1A-201ENST00000359461 NCLP19338 710 aaKnown RBP25.74■■□□□ 1.71
YIF1A-201ENST00000359461 SPIRE1Q08AE8 756 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 STK3Q13188 491 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 EMILIN2Q9BXX0 1053 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 DOCK8Q8NF50 2099 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 SPTBN4Q9H254 2564 aa25.74■■□□□ 1.71
YIF1A-201ENST00000359461 EFEMP2O95967 443 aa25.73■■□□□ 1.71
YIF1A-201ENST00000359461 EMC2Q15006 297 aa25.73■■□□□ 1.71
YIF1A-201ENST00000359461 EPHA7Q15375 998 aa25.73■■□□□ 1.71
YIF1A-201ENST00000359461 C15orf39Q6ZRI6 1047 aa25.73■■□□□ 1.71
YIF1A-201ENST00000359461 MARCH5Q9NX47 278 aa25.73■■□□□ 1.71
YIF1A-201ENST00000359461 RIF1Q5UIP0 2472 aaKnown RBP25.72■■□□□ 1.71
YIF1A-201ENST00000359461 SRGAP2CP0DJJ0 459 aa25.72■■□□□ 1.71
YIF1A-201ENST00000359461 YWHABP31946 246 aaKnown RBP25.72■■□□□ 1.71
YIF1A-201ENST00000359461 ASTLQ6HA08 431 aaPredicted RBP25.72■■□□□ 1.71
YIF1A-201ENST00000359461 CCDC149Q6ZUS6 474 aa25.72■■□□□ 1.71
YIF1A-201ENST00000359461 FERMT3Q86UX7 667 aa25.72■■□□□ 1.71
YIF1A-201ENST00000359461 RNF168Q8IYW5 571 aaPredicted RBP25.72■■□□□ 1.71
YIF1A-201ENST00000359461 SMG8Q8ND04 991 aaKnown RBP25.72■■□□□ 1.71
YIF1A-201ENST00000359461 TCP11Q8WWU5 503 aa25.72■■□□□ 1.71
YIF1A-201ENST00000359461 HERC2P3Q9BVR0 1158 aa25.72■■□□□ 1.71
YIF1A-201ENST00000359461 SLKQ9H2G2 1235 aaPredicted RBP25.72■■□□□ 1.71
YIF1A-201ENST00000359461 FAN1Q9Y2M0 1017 aa25.72■■□□□ 1.71
YIF1A-201ENST00000359461 NRP1O14786 923 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 ASAP2O43150 1006 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 SOD2P04179 222 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 ALDH2P05091 517 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 KLRC2P26717 231 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 SCRN1Q12765 414 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 PCBP1Q15365 356 aaKnown RBP eCLIP25.71■■□□□ 1.71
YIF1A-201ENST00000359461 OTOP3Q7RTS5 596 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 RNF149Q8NC42 400 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 CNNM3Q8NE01 707 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 CMASQ8NFW8 434 aaPredicted RBP25.71■■□□□ 1.71
YIF1A-201ENST00000359461 ACSF2Q96CM8 615 aaPredicted RBP25.71■■□□□ 1.71
YIF1A-201ENST00000359461 FAM193BQ96PV7 902 aaPredicted RBP25.71■■□□□ 1.71
YIF1A-201ENST00000359461 NAP1L4Q99733 375 aaKnown RBP25.71■■□□□ 1.71
YIF1A-201ENST00000359461 MRPL17Q9NRX2 175 aaKnown RBP25.71■■□□□ 1.71
YIF1A-201ENST00000359461 RGL1Q9NZL6 768 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 FAM186AA6NE01 2351 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 DMDP11532 3685 aa25.71■■□□□ 1.71
YIF1A-201ENST00000359461 CCNT1O60563 726 aaKnown RBP25.7■■□□□ 1.7
YIF1A-201ENST00000359461 CDKL5O76039 1030 aa25.7■■□□□ 1.7
YIF1A-201ENST00000359461 POMCP01189 267 aa25.7■■□□□ 1.7
YIF1A-201ENST00000359461 SSBP05455 408 aaKnown RBP eCLIP25.7■■□□□ 1.7
YIF1A-201ENST00000359461 NBL1P41271 181 aa25.7■■□□□ 1.7
YIF1A-201ENST00000359461 CLCN5P51795 746 aa25.7■■□□□ 1.7
YIF1A-201ENST00000359461 CWF19L1Q69YN2 538 aaKnown RBP25.7■■□□□ 1.7
YIF1A-201ENST00000359461 POTEDQ86YR6 584 aa25.7■■□□□ 1.7
YIF1A-201ENST00000359461 COLGALT2Q8IYK4 626 aa25.7■■□□□ 1.7
YIF1A-201ENST00000359461 OXER1Q8TDS5 423 aa25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms