RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 FZD1Q9UP38 647 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 GINS2Q9Y248 185 aa12.06□□□□□ -0.48
SSU72-202ENST00000359060 K7ERI5 159 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 SLCO1A2P46721 670 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 LIG3P49916 1009 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 PPP2R5CQ13362 524 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 TRIP13Q15645 432 aaPredicted RBP12.05□□□□□ -0.48
SSU72-202ENST00000359060 EPC2Q52LR7 807 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 PASD1Q8IV76 773 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 AGBL3Q8NEM8 1001 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 CASKIN2Q8WXE0 1202 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 ZNF668Q96K58 619 aaPredicted RBP12.05□□□□□ -0.48
SSU72-202ENST00000359060 CNOT8Q9UFF9 292 aaKnown RBP12.05□□□□□ -0.48
SSU72-202ENST00000359060 PNMA2Q9UL42 364 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 PPFIA4O75335 1185 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 ITGB5P18084 799 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 SFNP31947 248 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 HOOK3Q86VS8 718 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 SYTL5Q8TDW5 730 aaPredicted RBP12.05□□□□□ -0.48
SSU72-202ENST00000359060 SLC20A1Q8WUM9 679 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 LENG9Q96B70 501 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 ARL8AQ96BM9 186 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 POP1Q99575 1024 aaKnown RBP12.05□□□□□ -0.48
SSU72-202ENST00000359060 DNAJC17Q9NVM6 304 aaKnown RBP12.05□□□□□ -0.48
SSU72-202ENST00000359060 FBXL5Q9UKA1 691 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 CEP83Q9Y592 693 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 A0A1B0GUL6 1792 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 BTAF1O14981 1849 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 RGS16O15492 202 aaPredicted RBP12.05□□□□□ -0.48
SSU72-202ENST00000359060 VIMP08670 466 aaKnown RBP12.05□□□□□ -0.48
SSU72-202ENST00000359060 MARK3P27448 753 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 RARRES1P49788 294 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 B4GALNT4Q76KP1 1039 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 ZBTB33Q86T24 672 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 PI4K2AQ9BTU6 479 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 ANAPC7Q9UJX3 599 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 MYH1P12882 1939 aa12.05□□□□□ -0.48
SSU72-202ENST00000359060 BRDTQ58F21 947 aaPredicted RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 MUM1L1Q5H9M0 696 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 KIAA1755Q5JYT7 1200 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 KAZNQ674X7 775 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 MIS18BP1Q6P0N0 1132 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 IRF2BP2Q7Z5L9 587 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 SLC17A8Q8NDX2 589 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 VTI1AQ96AJ9 217 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 CDHR1Q96JP9 859 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 MPHOSPH6Q99547 160 aaKnown RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 NUP85Q9BW27 656 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 RANBP17Q9H2T7 1088 aaKnown RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 CSADQ9Y600 493 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 PIK3CDO00329 1044 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 FAM153BP0C7A2 387 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 ITGA4P13612 1032 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 CNGA1P29973 690 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 GMPSP49915 693 aaPredicted RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 OSTNP61366 133 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 FAM153CQ494X1 144 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 ZNF394Q53GI3 561 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 NBPF12Q5TAG4 269 aaPredicted RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 CCDC121Q6ZUS5 278 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 FBXL13Q8NEE6 735 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 MCPH1Q8NEM0 835 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 ZNF564Q8TBZ8 553 aaPredicted RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 FAM153AQ9UHL3 310 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 ALG6Q9Y672 507 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 FRMPD4Q14CM0 1322 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 BCORQ6W2J9 1755 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 A6NNZ2 444 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 MYO1CO00159 1063 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 CD58P19256 250 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 TMOD1P28289 359 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 NOVP48745 357 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 TUBB8Q3ZCM7 444 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 SGO2Q562F6 1265 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 RBM46Q8TBY0 533 aaKnown RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 MGARPQ8TDB4 240 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 ARAP2Q8WZ64 1704 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 EDIL3O43854 480 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 NPM3O75607 178 aaKnown RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 GAS8O95995 478 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 TMEM253P0C7T8 217 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 SRGAP2CP0DJJ0 459 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 ATF7P17544 494 aaPredicted RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 VCAM1P19320 739 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 ACOT2P49753 483 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 GUCY1A3Q02108 690 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 SPIRE1Q08AE8 756 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 TMEM143Q96AN5 459 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 POLR3FQ9H1D9 316 aaPredicted RBP12.04□□□□□ -0.48
SSU72-202ENST00000359060 ATP6V0A4Q9HBG4 840 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 USP20Q9Y2K6 914 aa12.04□□□□□ -0.48
SSU72-202ENST00000359060 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.03□□□□□ -0.48
SSU72-202ENST00000359060 THAP12O43422 761 aa12.03□□□□□ -0.48
SSU72-202ENST00000359060 GUCY2CP25092 1073 aa12.03□□□□□ -0.48
SSU72-202ENST00000359060 ADCY8P40145 1251 aa12.03□□□□□ -0.48
SSU72-202ENST00000359060 DLG4P78352 724 aa12.03□□□□□ -0.48
SSU72-202ENST00000359060 CLUL1Q15846 466 aa12.03□□□□□ -0.48
SSU72-202ENST00000359060 KCTD17Q8N5Z5 321 aa12.03□□□□□ -0.48
SSU72-202ENST00000359060 TSEN2Q8NCE0 465 aaKnown RBP12.03□□□□□ -0.48
SSU72-202ENST00000359060 CABS1Q96KC9 395 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms