RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 STXBP2Q15833 593 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 MAP9Q49MG5 647 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 EPC2Q52LR7 807 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 MEI1Q5TIA1 1274 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 ABHD15Q6UXT9 468 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 LBX2Q6XYB7 198 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 HDXQ7Z353 690 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 RIOX2Q8IUF8 465 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 LMO3Q8TAP4 145 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 SH2D3AQ9BRG2 576 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 NTPCRQ9BSD7 190 aaKnown RBP16.18■□□□□ 0.18
GABPB1-202ENST00000359031 GPR88Q9GZN0 384 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 ATP6V0A4Q9HBG4 840 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 USP20Q9Y2K6 914 aa16.18■□□□□ 0.18
GABPB1-202ENST00000359031 GRID2IPA4D2P6 1211 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 CCDC169A6NNP5 214 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 TISP43B9A030 160 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 DDX3XO00571 662 aaKnown RBP eCLIP16.17■□□□□ 0.184e-11■■■□□ 15.2
GABPB1-202ENST00000359031 CES2O00748 559 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 MAP2K7O14733 419 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 NCK2O43639 380 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 EIF3JO75822 258 aaKnown RBP16.17■□□□□ 0.18
GABPB1-202ENST00000359031 H2AFZP0C0S5 128 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 C2orf54Q08AI8 447 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 PRKG1Q13976 671 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 SWSAP1Q6NVH7 229 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 H2AFVQ71UI9 128 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 CCDC60Q8IWA6 550 aaPredicted RBP16.17■□□□□ 0.18
GABPB1-202ENST00000359031 SULF1Q8IWU6 871 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 RDH13Q8NBN7 331 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 DCPSQ96C86 337 aaKnown RBP16.17■□□□□ 0.18
GABPB1-202ENST00000359031 UBXN6Q9BZV1 441 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 MCOLN1Q9GZU1 580 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 ABCB6Q9NP58 842 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 SEPT9Q9UHD8 586 aaPredicted RBP16.17■□□□□ 0.18
GABPB1-202ENST00000359031 KCNG1Q9UIX4 513 aa16.17■□□□□ 0.18
GABPB1-202ENST00000359031 NCANO14594 1321 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 DENND3A2RUS2 1198 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 SCP2P22307 547 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 RGS19P49795 217 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 MXI1P50539 228 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 PPP3CAQ08209 521 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 KIF22Q14807 665 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 XKR3Q5GH77 459 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 TREML2Q5T2D2 321 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 PROCA1Q8NCQ7 364 aaPredicted RBP16.16■□□□□ 0.18
GABPB1-202ENST00000359031 SPATA4Q8NEY3 305 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 SLC30A5Q8TAD4 765 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 BSNDQ8WZ55 320 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 SYT11Q9BT88 431 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 PDLIM7Q9NR12 457 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 CYP26B1Q9NR63 512 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 TRPM7Q96QT4 1865 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 IREB2P48200 963 aaKnown RBP16.16■□□□□ 0.18
GABPB1-202ENST00000359031 ALDH5A1P51649 535 aaPredicted RBP16.16■□□□□ 0.18
GABPB1-202ENST00000359031 DLG4P78352 724 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 CFAP221Q4G0U5 840 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 C1orf220Q5T0J3 134 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 SAPCD2Q86UD0 394 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 ANKRD35Q8N283 1001 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 OLIG1Q8TAK6 271 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 LNX1Q8TBB1 728 aaPredicted RBP16.16■□□□□ 0.18
GABPB1-202ENST00000359031 KCNN1Q92952 543 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 L1RE1Q9UN81 338 aa16.16■□□□□ 0.18
GABPB1-202ENST00000359031 ATG7O95352 703 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 FTCDO95954 541 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 ADRB2P07550 413 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 SNRNP35Q16560 246 aaKnown RBP16.15■□□□□ 0.18
GABPB1-202ENST00000359031 PHLDB3Q6NSJ2 640 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 USP37Q86T82 979 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 TMC2Q8TDI7 906 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 U2AF1L4Q8WU68 220 aaKnown RBP16.15■□□□□ 0.18
GABPB1-202ENST00000359031 IFT74Q96LB3 600 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 FBXL18Q96ME1 805 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 XPNPEP1Q9NQW7 623 aa16.15■□□□□ 0.18
GABPB1-202ENST00000359031 RNF216Q9NWF9 866 aaPredicted RBP16.15■□□□□ 0.18
GABPB1-202ENST00000359031 A0A0G2JLL6 359 aaPredicted RBP16.14■□□□□ 0.17
GABPB1-202ENST00000359031 ADM5C9JUS6 153 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 TMEM253P0C7T8 217 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 GARTP22102 1010 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 CNGA1P29973 690 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 GCLMP48507 274 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 PPATQ06203 517 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 GPS2Q13227 327 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 TRMT1LQ7Z2T5 733 aaKnown RBP16.14■□□□□ 0.17
GABPB1-202ENST00000359031 PRRT2Q7Z6L0 340 aaPredicted RBP16.14■□□□□ 0.17
GABPB1-202ENST00000359031 SYCE1Q8N0S2 351 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 LRRC57Q8N9N7 239 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 PLEKHO2Q8TD55 490 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 LMBR1Q8WVP7 490 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 TAF4BQ92750 862 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 KIFC3Q9BVG8 833 aa16.14■□□□□ 0.17
GABPB1-202ENST00000359031 POLR3FQ9H1D9 316 aaPredicted RBP16.14■□□□□ 0.17
GABPB1-202ENST00000359031 SYNGAP1Q96PV0 1343 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 ANKRD63C9JTQ0 380 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 IRF6O14896 467 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 OATP04181 439 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 EDNRBP24530 442 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 ADSSP30520 456 aa16.13■□□□□ 0.17
GABPB1-202ENST00000359031 CXCR5P32302 372 aa16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms