RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 ERVK-7P63135 1459 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 F8VZ95 297 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 GGPS1O95749 300 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 ITGA6P23229 1130 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 FXR1P51114 621 aaKnown RBP eCLIP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 COPAP53621 1224 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DYNLT1P63172 113 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 EME1Q96AY2 570 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 ZBTB21Q9ULJ3 1066 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 SAT1P21673 171 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 NUP107P57740 925 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 HADHQ16836 314 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DARS2Q6PI48 645 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PROM2Q8N271 834 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 BEGAINQ9BUH8 593 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 POLE3Q9NRF9 147 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 TAF1BQ53T94 588 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 CALML6Q8TD86 181 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 BRD8Q9H0E9 1235 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 MARCOQ9UEW3 520 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 LEMD3Q9Y2U8 911 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 RFX7Q2KHR2 1363 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 BIVM-ERCC5R4GMW8 1640 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 NLRP9Q7RTR0 991 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 FAM178BQ8IXR5 827 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 ENGASEQ8NFI3 743 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 KCNK16Q96T55 309 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 TRIP11Q15643 1979 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 A0A1B0GW55 424 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 C16orf96A6NNT2 1141 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DUX4L2P0CJ85 424 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DUX4L3P0CJ86 424 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DUX4L4P0CJ87 422 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DUX4L5P0CJ88 424 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DUX4L6P0CJ89 424 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DUX4L7P0CJ90 424 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PIK3CAP42336 1068 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PPP4R3CPQ6ZMV5 832 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 SLFN12Q8IYM2 578 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DCLRE1BQ9H816 532 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 DUX4Q9UBX2 424 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 CDH16O75309 829 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 PLOD1Q02809 727 aaPredicted RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.45□□□□□ -1.38
VPS13B-203ENST00000358544 SMYD2Q9NRG4 433 aa6.45□□□□□ -1.38
VPS13B-203ENST00000358544 ASNA1O43681 348 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 LPXNO60711 386 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DPYDQ12882 1025 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DNAJC24Q6P3W2 148 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 ADNPQ9H2P0 1102 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 SH3GLB2Q9NR46 395 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DKK3Q9UBP4 350 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 FAM153AQ9UHL3 310 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 MAST1Q9Y2H9 1570 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 M0R3G1 203 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DEFA1P59665 94 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DEFA3P59666 94 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 MREGQ8N565 214 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 PRPF18Q99633 342 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 EDEM3Q9BZQ6 932 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DMGDHQ9UI17 866 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DENND2AQ9ULE3 1009 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 CCPG1Q9ULG6 757 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 SSU72P8A0A1W2PR75 194 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 CIAO1O76071 339 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 KRR1Q13601 381 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 TSGA10IPQ3SY00 556 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 FOXP2O15409 715 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 GLI1P08151 1106 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 KRT16P08779 473 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 BLVRAP53004 296 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 OTUD4Q01804 1114 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 GPS1Q13098 491 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 PDZD4Q76G19 769 aaPredicted RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 TMC4Q7Z404 712 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DDX42Q86XP3 938 aaKnown RBP eCLIP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 TNIP2Q8NFZ5 429 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 INTS2Q9H0H0 1204 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DIABLOQ9NR28 239 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 SASH1O94885 1247 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 RCAN1P53805 252 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DDR1Q08345 913 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 FAM47AQ5JRC9 791 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 IZUMO3Q5VZ72 239 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 SCUBE1Q8IWY4 988 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 NUP205Q92621 2012 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 H0YCG3 227 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 RGS2P41220 211 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 UNC13DQ70J99 1090 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 MTDHQ86UE4 582 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 KAT2BQ92831 832 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 MRGBPQ9NV56 204 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 TAGLN3Q9UI15 199 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DBR1Q9UK59 544 aaKnown RBP6.44□□□□□ -1.38
VPS13B-203ENST00000358544 DNAJC12Q9UKB3 198 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 AURKCQ9UQB9 309 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 STK36Q9NRP7 1315 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 C6orf229H3BNL8 230 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 COASYQ13057 564 aa6.44□□□□□ -1.38
VPS13B-203ENST00000358544 CCNYL1Q8N7R7 359 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms