RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 KIAA0355O15063 1070 aa27.89■■■□□ 2.06
SSBP3-202ENST00000357475 NBNO60934 754 aa27.89■■■□□ 2.06
SSBP3-202ENST00000357475 MAPK6Q16659 721 aa27.89■■■□□ 2.06
SSBP3-202ENST00000357475 KLHL10Q6JEL2 608 aa27.89■■■□□ 2.06
SSBP3-202ENST00000357475 ZNF710Q8N1W2 664 aa27.89■■■□□ 2.06
SSBP3-202ENST00000357475 SLC17A8Q8NDX2 589 aa27.89■■■□□ 2.06
SSBP3-202ENST00000357475 H0YCG3 227 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 TSPAN1O60635 241 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 CD52P31358 61 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 PMS1P54277 932 aaKnown RBP27.88■■■□□ 2.05
SSBP3-202ENST00000357475 STX1AQ16623 288 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 SLC39A4Q6P5W5 647 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 GUF1Q8N442 669 aaKnown RBP27.88■■■□□ 2.05
SSBP3-202ENST00000357475 CPB2Q96IY4 423 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 ACCSQ96QU6 501 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 TARS2Q9BW92 718 aaKnown RBP27.88■■■□□ 2.05
SSBP3-202ENST00000357475 DNAJC25Q9H1X3 360 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 KCTD10Q9H3F6 313 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 SEMA6BQ9H3T3 888 aa27.88■■■□□ 2.05
SSBP3-202ENST00000357475 ANKRD63C9JTQ0 380 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 ACKR2O00590 384 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 STRN3Q13033 797 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 ALCAMQ13740 583 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 COBLL1Q53SF7 1204 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 PPP4R3CPQ6ZMV5 832 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 CATSPER4Q7RTX7 472 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 CDR2LQ86X02 465 aaPredicted RBP27.87■■■□□ 2.05
SSBP3-202ENST00000357475 MED15Q96RN5 788 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 CTNND2Q9UQB3 1225 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 LTBP2Q14767 1821 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 UBE4BO95155 1302 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 TGFB1I1O43294 461 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 RPS6KA5O75582 802 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 FAM187BQ17R55 369 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 KNOP1Q1ED39 458 aaKnown RBP27.87■■■□□ 2.05
SSBP3-202ENST00000357475 STXBP4Q6ZWJ1 553 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 MLKLQ8NB16 471 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 HVCN1Q96D96 273 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 ERVK-5Q9HDB9 667 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 PRMT7Q9NVM4 692 aaPredicted RBP27.87■■■□□ 2.05
SSBP3-202ENST00000357475 ANO10Q9NW15 660 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 ST3GAL5Q9UNP4 418 aa27.87■■■□□ 2.05
SSBP3-202ENST00000357475 TRIM49BA6NDI0 452 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 TIMP1P01033 207 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 CCDC192P0DO97 292 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 ARF4P18085 180 aaPredicted RBP27.86■■■□□ 2.05
SSBP3-202ENST00000357475 PRPF4BQ13523 1007 aaKnown RBP27.86■■■□□ 2.05
SSBP3-202ENST00000357475 TCTN1Q2MV58 587 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 ANO6Q4KMQ2 910 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 TSHZ1Q6ZSZ6 1077 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 VWCEQ96DN2 955 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 ZBTB45Q96K62 511 aaPredicted RBP27.86■■■□□ 2.05
SSBP3-202ENST00000357475 HTATIP2Q9BUP3 242 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 PADI3Q9ULW8 664 aa27.86■■■□□ 2.05
SSBP3-202ENST00000357475 SFPQP23246 707 aaKnown RBP eCLIP27.85■■■□□ 2.05
SSBP3-202ENST00000357475 HOXA11P31270 313 aaPredicted RBP27.85■■■□□ 2.05
SSBP3-202ENST00000357475 STX17P56962 302 aa27.85■■■□□ 2.05
SSBP3-202ENST00000357475 NFX1Q12986 1120 aaKnown RBP27.85■■■□□ 2.05
SSBP3-202ENST00000357475 EEF1DP3Q658K8 133 aa27.85■■■□□ 2.05
SSBP3-202ENST00000357475 SYCP3Q8IZU3 236 aa27.85■■■□□ 2.05
SSBP3-202ENST00000357475 BICD1Q96G01 975 aa27.85■■■□□ 2.05
SSBP3-202ENST00000357475 HAPLN2Q9GZV7 340 aa27.85■■■□□ 2.05
SSBP3-202ENST00000357475 CNTNAP2Q9UHC6 1331 aa27.84■■■□□ 2.05
SSBP3-202ENST00000357475 ERLIN2O94905 339 aa27.84■■■□□ 2.05
SSBP3-202ENST00000357475 RAG1P15918 1043 aa27.84■■■□□ 2.05
SSBP3-202ENST00000357475 NELFBQ8WX92 580 aa27.84■■■□□ 2.05
SSBP3-202ENST00000357475 ACO2Q99798 780 aaKnown RBP27.84■■■□□ 2.05
SSBP3-202ENST00000357475 MRPL4Q9BYD3 311 aaKnown RBP27.84■■■□□ 2.05
SSBP3-202ENST00000357475 TMX1Q9H3N1 280 aa27.84■■■□□ 2.05
SSBP3-202ENST00000357475 AGPAT5Q9NUQ2 364 aa27.84■■■□□ 2.05
SSBP3-202ENST00000357475 HNRNPDLO14979 420 aaKnown RBP27.83■■■□□ 2.05
SSBP3-202ENST00000357475 SYN1P17600 705 aa27.83■■■□□ 2.05
SSBP3-202ENST00000357475 ZNF445P59923 1031 aa27.83■■■□□ 2.05
SSBP3-202ENST00000357475 PAK2Q13177 524 aa27.83■■■□□ 2.05
SSBP3-202ENST00000357475 GTPBP4Q9BZE4 634 aaKnown RBP27.83■■■□□ 2.05
SSBP3-202ENST00000357475 TMEM206Q9H813 350 aa27.83■■■□□ 2.05
SSBP3-202ENST00000357475 ABLIM1O14639 778 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 EVI5O60447 810 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 PIGRP01833 764 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 SCP2P22307 547 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 ADSSP30520 456 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 LIG4P49917 911 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 ZCWPW2Q504Y3 356 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 ANKRD40Q6AI12 368 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 CENPPQ6IPU0 288 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 LRSAM1Q6UWE0 723 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 DEFB128Q7Z7B8 93 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 DPF3Q92784 378 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 P2RX5Q93086 422 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 PRIMPOLQ96LW4 560 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 PDZD7Q9H5P4 517 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 ZMYND8Q9ULU4 1186 aaPredicted RBP27.82■■■□□ 2.04
SSBP3-202ENST00000357475 SQORQ9Y6N5 450 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 PSMA7O14818 248 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 CLIC2O15247 247 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 MGEA5O60502 916 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 PAK1Q13153 545 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 STIM1Q13586 685 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 ATF7IP2Q5U623 682 aa27.82■■■□□ 2.04
SSBP3-202ENST00000357475 ZSWIM2Q8NEG5 633 aa27.82■■■□□ 2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms