RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 CYP19A1P11511 503 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 CMA1P23946 247 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 ST8SIA6P61647 398 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 KIF23Q02241 960 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 VN1R5Q7Z5H4 357 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 GOLPH3Q9H4A6 298 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 NFU1Q9UMS0 254 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 HECW1Q76N89 1606 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 ARAP3Q8WWN8 1544 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 IPO5O00410 1097 aaKnown RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 NUGGCQ68CJ6 796 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 IFNEQ86WN2 208 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 LMNTD2Q8IXW0 634 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 RGL4Q8IZJ4 473 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 TDRD7Q8NHU6 1098 aaKnown RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 GPRC5CQ9NQ84 441 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 NBPF26B4DH59 902 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 HIP1RO75146 1068 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 NBPF9Q3BBW0 867 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 ABHD8Q96I13 439 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 CIPCQ9C0C6 399 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 FARP1Q9Y4F1 1045 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 TIAM1Q13009 1591 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 KIF14Q15058 1648 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 EGFRP00533 1210 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 KLRK1P26718 216 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 CLCN1P35523 988 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 KLK7P49862 253 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 PRELPP51888 382 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 PMS1P54277 932 aaKnown RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 NME5P56597 212 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 KCNH2Q12809 1159 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 LRRC31Q6UY01 552 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 STAG1Q8WVM7 1258 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 PURBQ96QR8 312 aaKnown RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 HDAC6Q9UBN7 1215 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 CARMIL3Q8ND23 1372 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 hCG_2014768A0A024R1R8 64 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 HIC1Q14526 733 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 TSNAXIP1Q2TAA8 658 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 STRBPQ96SI9 672 aaKnown RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 ATP8B3O60423 1300 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 SUPT6HQ7KZ85 1726 aaKnown RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 TEX33O43247 280 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 DIAPH2O60879 1101 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 POLE2P56282 527 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 KIAA1755Q5JYT7 1200 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 MIB1Q86YT6 1006 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 SIRT2Q8IXJ6 389 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 EXD1Q8NHP7 514 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 SDCCAG3Q96C92 435 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 MTFMTQ96DP5 389 aaKnown RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 DNAJC5Q9H3Z4 198 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 ZC3H11AO75152 810 aaKnown RBP eCLIP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 FOSP01100 380 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 CIITAP33076 1130 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 NBPF12Q5TAG4 269 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 CYP4A22Q5TCH4 519 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 C16orf46Q6P387 395 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 FLCNQ8NFG4 579 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 SH3BP1Q9Y3L3 701 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 LY6KQ17RY6 165 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 TMTC3Q6ZXV5 915 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 CAPS2Q9BXY5 557 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 TRPV6Q9H1D0 765 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 BSDC1Q9NW68 430 aaPredicted RBP7.83□□□□□ -1.16
VPS13A-202ENST00000357409 ADA2Q9NZK5 511 aa7.83□□□□□ -1.16
VPS13A-202ENST00000357409 FKBP3Q00688 224 aaKnown RBP7.82□□□□□ -1.16
VPS13A-202ENST00000357409 NUP93Q8N1F7 819 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 LXNQ9BS40 222 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 IRX2Q9BZI1 471 aaPredicted RBP7.82□□□□□ -1.16
VPS13A-202ENST00000357409 NDST4Q9H3R1 872 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 CPSF2Q9P2I0 782 aaKnown RBP7.82□□□□□ -1.16
VPS13A-202ENST00000357409 EIF4G3O43432 1585 aaKnown RBP7.82□□□□□ -1.16
VPS13A-202ENST00000357409 IGKV5-2P06315 115 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 SPATA31D3P0C874 917 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 YWHABP31946 246 aaKnown RBP7.82□□□□□ -1.16
VPS13A-202ENST00000357409 SOAT1P35610 550 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 RCSD1Q6JBY9 416 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 SPATA31D4Q6ZUB0 917 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 TBC1D1Q86TI0 1168 aaPredicted RBP7.82□□□□□ -1.16
VPS13A-202ENST00000357409 TBC1D16Q8TBP0 767 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 CEP41Q9BYV8 373 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 PRKAB1Q9Y478 270 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 COL17A1Q9UMD9 1497 aaPredicted RBP7.82□□□□□ -1.16
VPS13A-202ENST00000357409 ADM5C9JUS6 153 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 CYP7B1O75881 506 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 RGS9BPQ6ZS82 235 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 SRBD1Q8N5C6 995 aaKnown RBP7.82□□□□□ -1.16
VPS13A-202ENST00000357409 SENP7Q9BQF6 1050 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 SMPD4Q9NXE4 827 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 OGFRQ9NZT2 677 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 HEG1Q9ULI3 1381 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 LINC00854A0A1B0GVQ3 168 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 RAP1GAPP47736 663 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 VEPH1Q14D04 833 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 ARL13BQ3SXY8 428 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 FAM160B2Q86V87 743 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 KCNN4O15554 427 aa7.82□□□□□ -1.16
VPS13A-202ENST00000357409 DGKIO75912 1065 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms