RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 COA7Q96BR5 231 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 TMEM237Q96Q45 408 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 DHX36Q9H2U1 1008 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 STK38LQ9Y2H1 464 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 FOCADQ5VW36 1801 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 POTEB3A0JP26 581 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 DPPA5A6NC42 116 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 ANKRD62A6NC57 917 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 USP17L5A8MUK1 530 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 POTECB2RU33 542 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 NPTXRO95502 500 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 SPTY2D1Q68D10 685 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 RHBDF2Q6PJF5 856 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 POTEBQ6S5H4 581 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 SEPT12Q8IYM1 358 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 SLCO2A1Q92959 643 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 RAB3IPQ96QF0 476 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 EYA3Q99504 573 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 USP40Q9NVE5 1235 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 ALG6Q9Y672 507 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 CALUO43852 315 aaPredicted RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 SNHG28P0DPA3 235 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 ATP6V1C1P21283 382 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 RAB27AP51159 221 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 CCDC137Q6PK04 289 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 SH3TC2Q8TF17 1288 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 ZBTB10Q96DT7 871 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 MAGEB18Q96M61 343 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 TRIM7Q9C029 511 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 THAP2Q9H0W7 228 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 VAT1LQ9HCJ6 419 aa13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 TYW1Q9NV66 732 aaKnown RBP13.03□□□□□ -0.32
SMARCAL1-201ENST00000357276 UBR3Q6ZT12 1888 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 NR3C1P04150 777 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 TPBGLP0DKB5 382 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 PLCG2P16885 1265 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 CDK8P49336 464 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 ERFEQ4G0M1 354 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 THEMIS2Q5TEJ8 643 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 CD101Q93033 1021 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 GRAMD1AQ96CP6 724 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 ZSWIM1Q9BR11 485 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 UBA5Q9GZZ9 404 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 CDC42EP4Q9H3Q1 356 aaKnown RBP13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 QTRT2Q9H974 415 aaKnown RBP13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 TMOD4Q9NZQ9 345 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 ATF5Q9Y2D1 282 aaPredicted RBP13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 PLIN4Q96Q06 1357 aa13.02□□□□□ -0.32
SMARCAL1-201ENST00000357276 MED24O75448 989 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 TTLL1O95922 423 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 GM2AP17900 193 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 CASP4P49662 377 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 NFIL3Q16649 462 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 LONRF1Q17RB8 773 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 CFAP61Q8NHU2 1237 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 UHMK1Q8TAS1 419 aaKnown RBP13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 KRT35Q92764 455 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 CEP95Q96GE4 821 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 MBOAT7Q96N66 472 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 RPS6KC1Q96S38 1066 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 YIPF3Q9GZM5 350 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 ZNF287Q9HBT7 754 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 CYP39A1Q9NYL5 469 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 TAS2R14Q9NYV8 317 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 LGALS13Q9UHV8 139 aa13.02□□□□□ -0.33
SMARCAL1-201ENST00000357276 ATP5HO75947 161 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 GH1P01241 217 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 ATP5DP30049 168 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 MRPS35P82673 323 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 RBBP5Q15291 538 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 DCAF17Q5H9S7 520 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 ZNF772Q68DY9 489 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 CWF19L1Q69YN2 538 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 DZIP1Q86YF9 867 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 RHOT2Q8IXI1 618 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 LINC00116Q8NCU8 138 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 STK32AQ8WU08 396 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 TXLNGQ9NUQ3 528 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 ZMYND8Q9ULU4 1186 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 ADGRA3Q8IWK6 1321 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 PPP1R11O60927 126 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 KRT13P13646 458 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 COILP38432 576 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 MARCKSL1P49006 195 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 CTCFP49711 727 aaPredicted RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 SPIRE1Q08AE8 756 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 KIF22Q14807 665 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 PALB2Q86YC2 1186 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 MFN1Q8IWA4 741 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 ZFAND2BQ8WV99 257 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 DYDC1Q8WWB3 177 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 INPP5DQ92835 1189 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 FAM167BQ9BTA0 163 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 DDX23Q9BUQ8 820 aaKnown RBP13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 EURLQ9NYK6 297 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 TFCP2L1Q9NZI6 479 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 ZNF652Q9Y2D9 606 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 MAGEB2O15479 319 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 HIP1RO75146 1068 aa13.01□□□□□ -0.33
SMARCAL1-201ENST00000357276 MTA2O94776 668 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms