RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 TCF25Q9BQ70 676 aa18.6■□□□□ 0.57
PDLIM7-201ENST00000355572 RNF216Q9NWF9 866 aaPredicted RBP18.6■□□□□ 0.57
PDLIM7-201ENST00000355572 MIOSQ9NXC5 875 aa18.6■□□□□ 0.57
PDLIM7-201ENST00000355572 INO80B-WBP1J3KQ70 363 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 ASAP2O43150 1006 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 ZC3H11AO75152 810 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 RPA1P27694 616 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 SLC11A1P49279 550 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 FXR2P51116 673 aaKnown RBP eCLIP18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 ZP2Q05996 745 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 NOMO2Q5JPE7 1267 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 KCNK18Q7Z418 384 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 MMTAG2Q9BU76 263 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 CXCL16Q9H2A7 254 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 TLE6Q9H808 572 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 EIF4ENIF1Q9NRA8 985 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 SPG21Q9NZD8 308 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 DBR1Q9UK59 544 aaKnown RBP18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 LZTS1Q9Y250 596 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 IPPQ9Y573 584 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 C2orf16Q68DN1 1984 aa18.59■□□□□ 0.57
PDLIM7-201ENST00000355572 F8W810 466 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 GALTP07902 379 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 XRCC6P12956 609 aaKnown RBP eCLIP18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 TRAPPC10P48553 1259 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 NDUFV1P49821 464 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 RAB27AP51159 221 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 ORC2Q13416 577 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 GNL2Q13823 731 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 MXD4Q14582 209 aaPredicted RBP18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 SMAD2Q15796 467 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 EXOC8Q8IYI6 725 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 GJD3Q8N144 294 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 IGSF22Q8N9C0 903 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 GBP3Q9H0R5 595 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 NXF3Q9H4D5 531 aaKnown RBP18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 CD207Q9UJ71 328 aa18.58■□□□□ 0.56
PDLIM7-201ENST00000355572 C19orf67A6NJJ6 358 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 ST18O60284 1047 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 POMCP01189 267 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 NCLP19338 710 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 CCT6AP40227 531 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 POU5F1BQ06416 359 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 CSPP1Q1MSJ5 1256 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 LLGL2Q6P1M3 1020 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 PADI6Q6TGC4 694 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 SMRP1Q8NCR6 262 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 KIFC3Q9BVG8 833 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 MRPL9Q9BYD2 267 aaKnown RBP18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 RSAD1Q9HA92 442 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 ENTPD7Q9NQZ7 604 aa18.57■□□□□ 0.56
PDLIM7-201ENST00000355572 FAM86C2PA6NEL3 165 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 C2orf71A6NGG8 1288 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 E9PMD0 336 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 ERLIN2O94905 339 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 EYA4O95677 639 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 SMAD4Q13485 552 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 CDCA2Q69YH5 1023 aaPredicted RBP18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 GLB1LQ6UWU2 654 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 GSTCDQ8NEC7 633 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 IGSF21Q96ID5 467 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 ZFP42Q96MM3 310 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 NACC1Q96RE7 527 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 GAD1Q99259 594 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 APOL6Q9BWW8 343 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 APOL5Q9BWW9 433 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 NFKBIZQ9BYH8 718 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 ZBP1Q9H171 429 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 CSRNP2Q9H175 543 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 MARCH5Q9NX47 278 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 CACNG4Q9UBN1 327 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 NOL7Q9UMY1 257 aaKnown RBP18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 KIAA1024Q9UPX6 916 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 DENND4AQ7Z401 1863 aa18.56■□□□□ 0.56
PDLIM7-201ENST00000355572 VWA8A3KMH1 1905 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 LRRIQ4A6NIV6 560 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 NCK2O43639 380 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 NPTXRO95502 500 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 SKIP12755 728 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 CYP11B2P19099 503 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 PPM1AP35813 382 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 MLH1P40692 756 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 COASYQ13057 564 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 MCTP1Q6DN14 999 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 KANK3Q6NY19 840 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 SYCE2Q6PIF2 218 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 TMC7Q7Z402 723 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 DAW1Q8N136 415 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 LRRC15Q8TF66 581 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 CCDC43Q96MW1 224 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 CCDC113Q9H0I3 377 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 S1PR5Q9H228 398 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 BHMT2Q9H2M3 363 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 DDX19AQ9NUU7 478 aaKnown RBP18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 LRWD1Q9UFC0 647 aa18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 USP15Q9Y4E8 981 aaPredicted RBP18.55■□□□□ 0.56
PDLIM7-201ENST00000355572 CLASP2O75122 1294 aaKnown RBP18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 AKAP5P24588 427 aa18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 SSTR3P32745 418 aaPredicted RBP18.54■□□□□ 0.56
PDLIM7-201ENST00000355572 SCNN1GP51170 649 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms