RNA–Protein interactions for RNA: ENST00000355430.4

COLCA1-201, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best)

Gene COLCA1, Length 5,442 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-201ENST00000355430 RPAINQ86UA6 219 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 MLXIPLQ9NP71 852 aa13.2□□□□□ -0.3
COLCA1-201ENST00000355430 TOPORSQ9NS56 1045 aaPredicted RBP13.2□□□□□ -0.3
COLCA1-201ENST00000355430 TTI1O43156 1089 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 LSP1P33241 339 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 TWF2Q6IBS0 349 aaKnown RBP13.19□□□□□ -0.3
COLCA1-201ENST00000355430 ZNF746Q6NUN9 644 aaPredicted RBP13.19□□□□□ -0.3
COLCA1-201ENST00000355430 TTI2Q6NXR4 508 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 THOC1Q96FV9 657 aaKnown RBP13.19□□□□□ -0.3
COLCA1-201ENST00000355430 DYDC2Q96IM9 177 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 RNPC3Q96LT9 517 aaKnown RBP13.19□□□□□ -0.3
COLCA1-201ENST00000355430 TRIM51Q9BSJ1 452 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 ATP6V0A4Q9HBG4 840 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 RAB21Q9UL25 225 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 C6orf222P0C671 652 aaPredicted RBP13.19□□□□□ -0.3
COLCA1-201ENST00000355430 NAB2Q15742 525 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 QRICH1Q2TAL8 776 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 LGSNQ5TDP6 509 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 FRMD5Q7Z6J6 570 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 RNF180Q86T96 592 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 CPSF2Q9P2I0 782 aaKnown RBP13.19□□□□□ -0.3
COLCA1-201ENST00000355430 PFASO15067 1338 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 PEAK1Q9H792 1746 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
COLCA1-201ENST00000355430 POTEAQ6S8J7 498 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 PARP9Q8IXQ6 854 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 MCPH1Q8NEM0 835 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 RPF1Q9H9Y2 349 aaKnown RBP13.19□□□□□ -0.3
COLCA1-201ENST00000355430 KLC4Q9NSK0 619 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 KLRC1P26715 233 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 GCLMP48507 274 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 TNFAIP2Q03169 654 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 CXCL9Q07325 125 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 DSTYKQ6XUX3 929 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 LDHDQ86WU2 507 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 CLEC10AQ8IUN9 316 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 GOLPH3Q9H4A6 298 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 NYAP2Q9P242 653 aa13.19□□□□□ -0.3
COLCA1-201ENST00000355430 MIF4GDA9UHW6 222 aaKnown RBP13.18□□□□□ -0.3
COLCA1-201ENST00000355430 TRIM49P0CI25 452 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 TRIM49CP0CI26 452 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 KLRK1P26718 216 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 POLR2BP30876 1174 aaKnown RBP13.18□□□□□ -0.3
COLCA1-201ENST00000355430 GPC5P78333 572 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 SLFN12LQ6IEE8 588 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 FAM205AQ6ZU69 1335 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 DDX42Q86XP3 938 aaKnown RBP eCLIP13.18□□□□□ -0.3
COLCA1-201ENST00000355430 CHMP6Q96FZ7 201 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 RASA1P20936 1047 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 SEC24CP53992 1094 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 CASC4Q6P4E1 433 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 BANK1Q8NDB2 785 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 TRIM11Q96F44 468 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 BCL9O00512 1426 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 SOX5P35711 763 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 EXOC1LA0A1B0GW35 172 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 KRT1P04264 644 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 BPIFB4P59827 614 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 SARNPP82979 210 aaKnown RBP13.18□□□□□ -0.3
COLCA1-201ENST00000355430 LMNB2Q03252 620 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 MAP1SQ66K74 1059 aaPredicted RBP13.18□□□□□ -0.3
COLCA1-201ENST00000355430 CHST13Q8NET6 341 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 RFFLQ8WZ73 363 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
COLCA1-201ENST00000355430 FAM237AA0A1B0GTK4 181 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 K7ERI5 159 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 LUC7L3O95232 432 aaKnown RBP13.18□□□□□ -0.3
COLCA1-201ENST00000355430 LRRC14Q15048 493 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 HADHQ16836 314 aaKnown RBP13.18□□□□□ -0.3
COLCA1-201ENST00000355430 LRIG3Q6UXM1 1119 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 THEM5Q8N1Q8 247 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 VCPKMTQ9H867 229 aa13.18□□□□□ -0.3
COLCA1-201ENST00000355430 ZNF233A6NK53 670 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 FTLP02792 175 aaPredicted RBP13.17□□□□□ -0.3
COLCA1-201ENST00000355430 SLC9A1P19634 815 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 PDZD4Q76G19 769 aaPredicted RBP13.17□□□□□ -0.3
COLCA1-201ENST00000355430 CASKIN2Q8WXE0 1202 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 ARL8AQ96BM9 186 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 FAM81BQ96LP2 452 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 PLAGL2Q9UPG8 496 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 UCHL3P15374 230 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 CDC42EP1Q00587 391 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 USP38Q8NB14 1042 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 GSDMBQ8TAX9 411 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 TXLNGQ9NUQ3 528 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.17□□□□□ -0.3
COLCA1-201ENST00000355430 INPP5FQ9Y2H2 1132 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 GH1P01241 217 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 FGFR4P22455 802 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 PRELPP51888 382 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 FOXR1Q6PIV2 292 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 CFAP57Q96MR6 1250 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 SEMA6BQ9H3T3 888 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 SLC12A6Q9UHW9 1150 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 FAM187AA6NFU0 413 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 GRB10Q13322 594 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 ZNF449Q6P9G9 518 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 DAGLBQ8NCG7 672 aa13.17□□□□□ -0.3
COLCA1-201ENST00000355430 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.17□□□□□ -0.3
COLCA1-201ENST00000355430 DYNLT1P63172 113 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms