RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 SHBGP04278 402 aa14.9□□□□□ -0.02
EBF3-201ENST00000355311 PRLRP16471 622 aa14.9□□□□□ -0.02
EBF3-201ENST00000355311 DEFB132Q7Z7B7 95 aa14.9□□□□□ -0.02
EBF3-201ENST00000355311 MIEF2Q96C03 454 aa14.9□□□□□ -0.02
EBF3-201ENST00000355311 TBC1D31Q96DN5 1066 aa14.9□□□□□ -0.02
EBF3-201ENST00000355311 TEKT3Q9BXF9 490 aa14.9□□□□□ -0.02
EBF3-201ENST00000355311 GPR88Q9GZN0 384 aa14.9□□□□□ -0.02
EBF3-201ENST00000355311 DDX20Q9UHI6 824 aaKnown RBP14.9□□□□□ -0.02
EBF3-201ENST00000355311 OPA1O60313 960 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 EMBQ6PCB8 327 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 IQCKQ8N0W5 287 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 MBOAT7Q96N66 472 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 NACC1Q96RE7 527 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 NUCKS1Q9H1E3 243 aaKnown RBP14.89□□□□□ -0.03
EBF3-201ENST00000355311 GGT7Q9UJ14 662 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 TMX2Q9Y320 296 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 GJA3Q9Y6H8 435 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 MMEP08473 750 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 NR1D1P20393 614 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 SSR1P43307 286 aaKnown RBP14.89□□□□□ -0.03
EBF3-201ENST00000355311 MRPS9P82933 396 aaKnown RBP14.89□□□□□ -0.03
EBF3-201ENST00000355311 IFFO1Q0D2I5 559 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 NEDD9Q14511 834 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 PASD1Q8IV76 773 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 TAB3Q8N5C8 712 aaPredicted RBP14.89□□□□□ -0.03
EBF3-201ENST00000355311 GMCL1P1Q8NEA9 526 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 ZNF473Q8WTR7 871 aaKnown RBP14.89□□□□□ -0.03
EBF3-201ENST00000355311 SLC40A1Q9NP59 571 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 CTDP1Q9Y5B0 961 aaPredicted RBP14.89□□□□□ -0.03
EBF3-201ENST00000355311 ALG6Q9Y672 507 aa14.89□□□□□ -0.03
EBF3-201ENST00000355311 EIF4E1BA6NMX2 242 aaKnown RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 KRT5P13647 590 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 RPS6P62753 249 aaKnown RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 BFSP1Q12934 665 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 KRT71Q3SY84 523 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 HP1BP3Q5SSJ5 553 aaPredicted RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 FAM228AQ86W67 206 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 TMEM130Q8N3G9 435 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 SEMA4DQ92854 862 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 TATDN2Q93075 761 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 CCT8L2Q96SF2 557 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 PCDHB18PQ96TA0 734 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.88□□□□□ -0.03
EBF3-201ENST00000355311 TAF1DQ9H5J8 278 aaPredicted RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 HAUS2Q9NVX0 235 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 ECHS1P30084 290 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 MARSP56192 900 aaKnown RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 MAPK7Q13164 816 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 RASA3Q14644 834 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 EEPD1Q7L9B9 569 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 BORCS6Q96GS4 357 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 POLR3CQ9BUI4 534 aaPredicted RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 CNOT8Q9UFF9 292 aaKnown RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 CHUKO15111 745 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 ADRB2P07550 413 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 JAM2P57087 298 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 SPOPLQ6IQ16 392 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 PPP4R3CPQ6ZMV5 832 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 OTUD6AQ7L8S5 288 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 HAUS6Q7Z4H7 955 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 ZDHHC14Q8IZN3 488 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 C1orf54Q8WWF1 131 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 SYN2Q92777 582 aaPredicted RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 MRRFQ96E11 262 aaKnown RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 CCDC114Q96M63 670 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 HEMGNQ9BXL5 484 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 EDEM3Q9BZQ6 932 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 VCPKMTQ9H867 229 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 METTL14Q9HCE5 456 aaKnown RBP14.88□□□□□ -0.03
EBF3-201ENST00000355311 APEX2Q9UBZ4 518 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 MCM8Q9UJA3 840 aa14.88□□□□□ -0.03
EBF3-201ENST00000355311 UBR3Q6ZT12 1888 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 FGFR4P22455 802 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 CIITAP33076 1130 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 MAGOHP61326 146 aaKnown RBP14.87□□□□□ -0.03
EBF3-201ENST00000355311 MTMR1Q13613 665 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 MTMR2Q13614 643 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 CHURC1Q8WUH1 139 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 ATG4AQ8WYN0 398 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 MAGOHBQ96A72 148 aaKnown RBP14.87□□□□□ -0.03
EBF3-201ENST00000355311 GLT8D2Q9H1C3 349 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 KLHL11Q9NVR0 708 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 PHF20L1A8MW92 1017 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 DNM1LO00429 736 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 CAP2P40123 477 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 VAMP7P51809 220 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 SEMA3FQ13275 785 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 ZFYVE27Q5T4F4 411 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 MGARPQ8TDB4 240 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 FAXDC2Q96IV6 333 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 NAP1L4Q99733 375 aaKnown RBP14.87□□□□□ -0.03
EBF3-201ENST00000355311 HSPBP1Q9NZL4 362 aa14.87□□□□□ -0.03
EBF3-201ENST00000355311 WNT10BO00744 389 aa14.86□□□□□ -0.03
EBF3-201ENST00000355311 DPEP1P16444 411 aa14.86□□□□□ -0.03
EBF3-201ENST00000355311 YWHABP31946 246 aaKnown RBP14.86□□□□□ -0.03
EBF3-201ENST00000355311 IFNAR2P48551 515 aa14.86□□□□□ -0.03
EBF3-201ENST00000355311 RSBN1LQ6PCB5 846 aaPredicted RBP14.86□□□□□ -0.03
EBF3-201ENST00000355311 B4GALNT4Q76KP1 1039 aa14.86□□□□□ -0.03
EBF3-201ENST00000355311 CPA5Q8WXQ8 436 aa14.86□□□□□ -0.03
EBF3-201ENST00000355311 SLC5A5Q92911 643 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms