RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 RPS6KA1Q15418 735 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 KNOP1Q1ED39 458 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 ZC2HC1CQ53FD0 456 aaPredicted RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 ARMC9Q7Z3E5 817 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 FBXO11Q86XK2 927 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 RNF10Q8N5U6 811 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 GANQ9H2C0 597 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 KDM4CQ9H3R0 1056 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 TMBIM4Q9HC24 238 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 KCNMB3Q9NPA1 279 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 AJAP1Q9UKB5 411 aaPredicted RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 ZMYND8Q9ULU4 1186 aaPredicted RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 SMCHD1A6NHR9 2005 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 RAD51CO43502 376 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 ABCB4P21439 1286 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 NMT1P30419 496 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 MAGEA10P43363 369 aaPredicted RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 ADCY1Q08828 1119 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 CCDC38Q502W7 563 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 ALKBH5Q6P6C2 394 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 ERMNQ8TAM6 284 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 U2AF1L4Q8WU68 220 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 RBM41Q96IZ5 413 aaKnown RBP10.1□□□□□ -0.79
SMG6-202ENST00000354901 AMNQ9BXJ7 453 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 LRRC4CQ9HCJ2 640 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 GCNT4Q9P109 453 aa10.1□□□□□ -0.79
SMG6-202ENST00000354901 EML1O00423 815 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 GNA14O95837 355 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 AFPP02771 609 aaKnown RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 SPATA31C1P0DKV0 1188 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 PRPF4BQ13523 1007 aaKnown RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 TBC1D10BQ4KMP7 808 aaPredicted RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 C1QTNF12Q5T7M4 302 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 RBM46Q8TBY0 533 aaKnown RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 CAVIN3Q969G5 261 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 SYT15Q9BQS2 421 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 DDX47Q9H0S4 455 aaKnown RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 TDRD3Q9H7E2 651 aaKnown RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 LNPEPQ9UIQ6 1025 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 PNMA3Q9UL41 463 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 ATP8A1Q9Y2Q0 1164 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 PLIN4Q96Q06 1357 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 PPIP5K2O43314 1243 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 CREB3O43889 395 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 PFDN1O60925 122 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 NDUFB10O96000 172 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 GH2P01242 217 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 NR3C1P04150 777 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 DRD4P21917 467 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 PON1P27169 355 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 HOXD13P35453 343 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 DEUP1Q05D60 604 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 NUGGCQ68CJ6 796 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 TRPM8Q7Z2W7 1104 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 COL23A1Q86Y22 540 aaPredicted RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 SLFN12Q8IYM2 578 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 MYCT1Q8N699 235 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 ABTB1Q969K4 478 aaPredicted RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 L3MBTL3Q96JM7 780 aaPredicted RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 EDEM3Q9BZQ6 932 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 PHACTR1Q9C0D0 580 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 OCEL1Q9H607 264 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 MSH4O15457 936 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 CHN1P15882 459 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 CYP2J2P51589 502 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 USP11P51784 963 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 JAG1P78504 1218 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 ZNF844Q08AG5 666 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 COG2Q14746 738 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 MUM1Q2TAK8 710 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 MEI1Q5TIA1 1274 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 CCDC174Q6PII3 467 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 SNRNP27Q8WVK2 155 aaKnown RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 FGD4Q96M96 766 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 MTFR1LQ9H019 292 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.09□□□□□ -0.79
SMG6-202ENST00000354901 RABGAP1Q9Y3P9 1069 aa10.09□□□□□ -0.79
SMG6-202ENST00000354901 DDX39AO00148 427 aaKnown RBP10.08□□□□□ -0.8
SMG6-202ENST00000354901 ETS2P15036 469 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 FLT3P36888 993 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 SERPINB4P48594 390 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 ABCB5Q2M3G0 1257 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 SH3BP5LQ7L8J4 393 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 SIAH1Q8IUQ4 282 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 ETNPPLQ8TBG4 499 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 CCHCR1Q8TD31 782 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 CCDC17Q96LX7 622 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 XPO6Q96QU8 1125 aaKnown RBP10.08□□□□□ -0.8
SMG6-202ENST00000354901 PRMT1Q99873 361 aaKnown RBP10.08□□□□□ -0.8
SMG6-202ENST00000354901 FAM13AO94988 1023 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 TRIM49P0CI25 452 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 TRIM49CP0CI26 452 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 SPIRE1Q08AE8 756 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 ARHGAP44Q17R89 818 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 HYIQ5T013 277 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 ACBD5Q5T8D3 534 aaPredicted RBP10.08□□□□□ -0.8
SMG6-202ENST00000354901 RASIP1Q5U651 963 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 RUFY4Q6ZNE9 571 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 OTUD6AQ7L8S5 288 aa10.08□□□□□ -0.8
SMG6-202ENST00000354901 IRF2BP2Q7Z5L9 587 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms