RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 ART4Q93070 314 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 CEP63Q96MT8 703 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 GMEB1Q9Y692 573 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 DDX3XO00571 662 aaKnown RBP eCLIP8.43□□□□□ -1.067e-37■■□□□ 14.4
CD46-203ENST00000354848 ETS2P15036 469 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 VCAM1P19320 739 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 CHRNA3P32297 505 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 BPIFB4P59827 614 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 PPATQ06203 517 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 SLC34A1Q06495 639 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 TMEM62Q0P6H9 643 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 TNIP1Q15025 636 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 ZRSR2Q15696 482 aaKnown RBP8.43□□□□□ -1.06
CD46-203ENST00000354848 ACSBG2Q5FVE4 666 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 TRMT10CQ7L0Y3 403 aaKnown RBP8.43□□□□□ -1.06
CD46-203ENST00000354848 KBTBD2Q8IY47 623 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 CYP4X1Q8N118 509 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 PRELID2Q8N945 189 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 U2AF1L4Q8WU68 220 aaKnown RBP8.43□□□□□ -1.06
CD46-203ENST00000354848 DDX12PQ92771 950 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 PNMA5Q96PV4 448 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 MIPEPQ99797 713 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 NLRP2Q9NX02 1062 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 NKIRAS1Q9NYS0 192 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 PCYOX1Q9UHG3 505 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 PHTF1Q9UMS5 762 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 COMMD3-BMI1R4GMX3 469 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 WNK3Q9BYP7 1800 aa8.43□□□□□ -1.06
CD46-203ENST00000354848 FAM196BA6NMK8 535 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 DESP17661 470 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 CYP7A1P22680 504 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 RTP1P59025 263 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 AP1B1Q10567 949 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 WDR72Q3MJ13 1102 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 LIN52Q52LA3 116 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 ZNF365Q70YC5 407 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 DAGLBQ8NCG7 672 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 PPFIBP2Q8ND30 876 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 ALG3Q92685 438 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 NR1H4Q96RI1 486 aaPredicted RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 ZNF184Q99676 751 aaPredicted RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 TMOD4Q9NZQ9 345 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 LRP2BPQ9P2M1 347 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 STK17AQ9UEE5 414 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 HNRNPRO43390 633 aaKnown RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 TTLL1O95922 423 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 FGRP09769 529 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 CCNFP41002 786 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 CDR2Q01850 454 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 DNAJC3Q13217 504 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 TRIM28Q13263 835 aaKnown RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 EXOC3L4Q17RC7 722 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 TAF1BQ53T94 588 aaPredicted RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 FAM47AQ5JRC9 791 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 CCDC137Q6PK04 289 aaKnown RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 VPS36Q86VN1 386 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 ZDHHC14Q8IZN3 488 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 DTX3LQ8TDB6 740 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 SH3RF3Q8TEJ3 882 aaPredicted RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 CADM1Q9BY67 442 aaKnown RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 TAOK3Q9H2K8 898 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 KRT82Q9NSB4 513 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 RHBDL2Q9NX52 303 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.42□□□□□ -1.066e-9■■□□□ 12.6
CD46-203ENST00000354848 LNPEPQ9UIQ6 1025 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 IGSF9BQ9UPX0 1349 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 POTEFA5A3E0 1075 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 MAP3K7O43318 606 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 PSMG1O95456 288 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 POTEIP0CG38 1075 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 POTEJP0CG39 1038 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 NEK3P51956 506 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 CTSWP56202 376 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 WDR4P57081 412 aaKnown RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 IL9RQ01113 521 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 EVX2Q03828 476 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 POTEEQ6S8J3 1075 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 PPP1R21Q6ZMI0 780 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 CEP128Q6ZU80 1094 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 HS2ST1Q7LGA3 356 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 NELFCDQ8IXH7 590 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 SRRM1Q8IYB3 904 aaKnown RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 RFFLQ8WZ73 363 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 SPOCK2Q92563 424 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 HIC2Q96JB3 615 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 TUBGCP5Q96RT8 1024 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 IWS1Q96ST2 819 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 FGFBP2Q9BYJ0 223 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 METTL14Q9HCE5 456 aaKnown RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 SLCO1B3Q9NPD5 702 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 AAASQ9NRG9 546 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 ETNK2Q9NVF9 386 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 LARSQ9P2J5 1176 aaKnown RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 TBK1Q9UHD2 729 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 ZNF330Q9Y3S2 320 aaPredicted RBP8.42□□□□□ -1.06
CD46-203ENST00000354848 TNS3Q68CZ2 1445 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 ADGRA3Q8IWK6 1321 aa8.42□□□□□ -1.06
CD46-203ENST00000354848 MAGEB6P1A0A0J9YX57 407 aa8.41□□□□□ -1.06
CD46-203ENST00000354848 PALM3A6NDB9 673 aaPredicted RBP8.41□□□□□ -1.06
CD46-203ENST00000354848 MAGEB2O15479 319 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms