RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PLEKHH3Q7Z736 793 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 DNAAF3Q8N9W5 541 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 ENGASEQ8NFI3 743 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 HDAC6Q9UBN7 1215 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 PDGFRBP09619 1106 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 CYP11B2P19099 503 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 THEM5Q8N1Q8 247 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 SMC6Q96SB8 1091 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 KIAA1683Q9H0B3 1180 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 TUBE1Q9UJT0 475 aa14.69□□□□□ -0.06
SMC6-201ENST00000351948 PSMC1P62191 440 aaKnown RBP14.68□□□□□ -0.06
SMC6-201ENST00000351948 LY6KQ17RY6 165 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 LGSNQ5TDP6 509 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 TTC19Q6DKK2 380 aaPredicted RBP14.68□□□□□ -0.06
SMC6-201ENST00000351948 GPRASP2Q96D09 838 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 KBTBD13C9JR72 458 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 HOXA7P31268 230 aaPredicted RBP14.68□□□□□ -0.06
SMC6-201ENST00000351948 BRD3Q15059 726 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 C6orf163Q5TEZ5 329 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 FRMD5Q7Z6J6 570 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 GSDMBQ8TAX9 411 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 PPP1R13LQ8WUF5 828 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 ZMYND15Q9H091 742 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 PXMP2Q9NR77 195 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 PITPNM2Q9BZ72 1349 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 ECEL1O95672 775 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 PSMC6P62333 389 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 EPC2Q52LR7 807 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 MUM1L1Q5H9M0 696 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 PURBQ96QR8 312 aaKnown RBP14.68□□□□□ -0.06
SMC6-201ENST00000351948 AGXT2Q9BYV1 514 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 PDE11AQ9HCR9 933 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 HEY1Q9Y5J3 304 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 GAKO14976 1311 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 ARHGEF37A1IGU5 675 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 MAFGO15525 162 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 MOCS2O96007 188 aaPredicted RBP14.68□□□□□ -0.06
SMC6-201ENST00000351948 FXR1P51114 621 aaKnown RBP eCLIP14.68□□□□□ -0.06
SMC6-201ENST00000351948 GPC5P78333 572 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 ATP11AP98196 1134 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 TSPY1Q01534 308 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 PPP2R5EQ16537 467 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 GLRA4Q5JXX5 417 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 TAOK1Q7L7X3 1001 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 RAB3IL1Q8TBN0 382 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 CCT6BQ92526 530 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 NUP85Q9BW27 656 aa14.68□□□□□ -0.06
SMC6-201ENST00000351948 RPS6KA5O75582 802 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 SLCO1A2P46721 670 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 URGCPQ8TCY9 931 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 ASCC2Q9H1I8 757 aaPredicted RBP14.67□□□□□ -0.06
SMC6-201ENST00000351948 CYP26B1Q9NR63 512 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 KLK14Q9P0G3 267 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 CPSF3Q9UKF6 684 aaKnown RBP14.67□□□□□ -0.06
SMC6-201ENST00000351948 SHPRHQ149N8 1683 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 TYW5A2RUC4 315 aaKnown RBP14.67□□□□□ -0.06
SMC6-201ENST00000351948 PNMA6AP0CW24 399 aaPredicted RBP14.67□□□□□ -0.06
SMC6-201ENST00000351948 CPB1P15086 417 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 DSG3P32926 999 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 AMIGO3Q86WK7 504 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 CCDC13Q8IYE1 715 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 SLC12A6Q9UHW9 1150 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 MRC1P22897 1456 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 FAM86B1E9PN63 330 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 IRF6O14896 467 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 FAM86B2P0C5J1 330 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 ZNF286BP0CG31 522 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 ALDH3A1P30838 453 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 FMO5P49326 533 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 RWDD2BP57060 319 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 SETDB1Q15047 1291 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 ATF7IP2Q5U623 682 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 GJB7Q6PEY0 223 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 RHOT2Q8IXI1 618 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 GABPB2Q8TAK5 448 aaPredicted RBP14.67□□□□□ -0.06
SMC6-201ENST00000351948 HAUS2Q9NVX0 235 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 USP20Q9Y2K6 914 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 PTPRAP18433 802 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 RGS7P49802 495 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 FCGRTP55899 365 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 NME3Q13232 169 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 LAMC2Q13753 1193 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 KIZQ2M2Z5 673 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 NFRKBQ6P4R8 1299 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 AFG1LQ8WV93 481 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 PLCB1Q9NQ66 1216 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 CHORDC1Q9UHD1 332 aaPredicted RBP14.67□□□□□ -0.06
SMC6-201ENST00000351948 ATP8B3O60423 1300 aa14.67□□□□□ -0.06
SMC6-201ENST00000351948 HBP1O60381 514 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 CASP4P49662 377 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 NCOA4Q13772 614 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 ZNF564Q8TBZ8 553 aaPredicted RBP14.66□□□□□ -0.06
SMC6-201ENST00000351948 FHOD1Q9Y613 1164 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 ADGRG1Q9Y653 693 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 SCINQ9Y6U3 715 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 RGPD8O14715 1765 aaPredicted RBP14.66□□□□□ -0.06
SMC6-201ENST00000351948 VTNP04004 478 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 TBXAS1P24557 533 aaPredicted RBP14.66□□□□□ -0.06
SMC6-201ENST00000351948 SOX5P35711 763 aa14.66□□□□□ -0.06
SMC6-201ENST00000351948 BIRC2Q13490 618 aa14.66□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms