RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 ADRB2P07550 413 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 YWHABP31946 246 aaKnown RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 HSPA9P38646 679 aaKnown RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 LLGL1Q15334 1064 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 UBLCP1Q8WVY7 318 aaPredicted RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 CCT8L2Q96SF2 557 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 TRIM51Q9BSJ1 452 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 EPN3Q9H201 632 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 TOPORSQ9NS56 1045 aaPredicted RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 UBIAD1Q9Y5Z9 338 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 NFS1Q9Y697 457 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 CPP00450 1065 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 CTNNA1P35221 906 aaKnown RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 MDH1P40925 334 aaKnown RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 PRPF4BQ13523 1007 aaKnown RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 PGM5Q15124 567 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 HAUS6Q7Z4H7 955 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 SLFN11Q7Z7L1 901 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 FAM83AQ86UY5 434 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 CBWD2Q8IUF1 395 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 WHAMMQ8TF30 809 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 CCDC127Q96BQ5 260 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 EHMT1Q9H9B1 1298 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 TMBIM4Q9HC24 238 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 TMOD4Q9NZQ9 345 aa17.96■□□□□ 0.47
PDAP1-201ENST00000350498 PPP1R1BQ9UD71 204 aaPredicted RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 CNOT8Q9UFF9 292 aaKnown RBP17.96■□□□□ 0.47
PDAP1-201ENST00000350498 VCAM1P19320 739 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 MARCKSL1P49006 195 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 ZNF844Q08AG5 666 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 FAM102BQ5T8I3 360 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 NBPF12Q5TAG4 269 aaPredicted RBP17.95■□□□□ 0.46
PDAP1-201ENST00000350498 ZKSCAN4Q969J2 545 aaPredicted RBP17.95■□□□□ 0.46
PDAP1-201ENST00000350498 ATG4CQ96DT6 458 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 MKNK1Q9BUB5 465 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 HSPBP1Q9NZL4 362 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 SEL1LQ9UBV2 794 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 TMEM110-MUSTN1A8MSY1 372 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 PLA2G6O60733 806 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 ADSSP30520 456 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 QARSP47897 775 aaKnown RBP17.95■□□□□ 0.46
PDAP1-201ENST00000350498 VAMP7P51809 220 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 MAP2K1Q02750 393 aaPredicted RBP17.95■□□□□ 0.46
PDAP1-201ENST00000350498 C10orf76Q5T2E6 689 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 POTEAQ6S8J7 498 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 NLRP14Q86W24 1093 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 MYCBPAPQ8TBZ2 947 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 RMDN3Q96TC7 470 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 SLC38A10Q9HBR0 1119 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 ERVK-5Q9HDB9 667 aa17.95■□□□□ 0.46
PDAP1-201ENST00000350498 RGS17Q9UGC6 210 aaPredicted RBP17.95■□□□□ 0.46
PDAP1-201ENST00000350498 PGRMC1O00264 195 aaKnown RBP17.94■□□□□ 0.46
PDAP1-201ENST00000350498 SGPL1O95470 568 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 TNFAIP3P21580 790 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 HMGB2P26583 209 aaKnown RBP17.94■□□□□ 0.46
PDAP1-201ENST00000350498 MKRN4PQ13434 485 aaPredicted RBP17.94■□□□□ 0.46
PDAP1-201ENST00000350498 SPRED3Q2MJR0 410 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 VPS36Q86VN1 386 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 BSNDQ8WZ55 320 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 SEMA4DQ92854 862 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 BTBD6Q96KE9 485 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 PCDHB18PQ96TA0 734 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 RPAP3Q9H6T3 665 aaPredicted RBP17.94■□□□□ 0.46
PDAP1-201ENST00000350498 FGGP02679 453 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 HNRNPH1P31943 449 aaKnown RBP17.94■□□□□ 0.46
PDAP1-201ENST00000350498 GTF2A1P52655 376 aaPredicted RBP17.94■□□□□ 0.46
PDAP1-201ENST00000350498 IFT88Q13099 833 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 NFIL3Q16649 462 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 QPCTQ16769 361 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 XKR9Q5GH70 373 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 UBAP2Q5T6F2 1119 aaKnown RBP17.94■□□□□ 0.46
PDAP1-201ENST00000350498 RNF187Q5TA31 235 aaPredicted RBP17.94■□□□□ 0.46
PDAP1-201ENST00000350498 CD302Q8IX05 232 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 ALG3Q92685 438 aa17.94■□□□□ 0.46
PDAP1-201ENST00000350498 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.94■□□□□ 0.466e-7■■□□□ 11.7
PDAP1-201ENST00000350498 DOCK5Q9H7D0 1870 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 CCDC169A6NNP5 214 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 PLS3P13797 630 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 PPATQ06203 517 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 TRAF1Q13077 416 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 BAATQ14032 418 aaPredicted RBP17.93■□□□□ 0.46
PDAP1-201ENST00000350498 PCNX4Q63HM2 1172 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 ACTRT1Q8TDG2 376 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 HES6Q96HZ4 224 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 LARSQ9P2J5 1176 aaKnown RBP17.93■□□□□ 0.46
PDAP1-201ENST00000350498 DDX3YO15523 660 aaKnown RBP17.93■□□□□ 0.46
PDAP1-201ENST00000350498 MAP3K10Q02779 954 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 ANO5Q75V66 913 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 OTUD6BQ8N6M0 293 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 AGBL3Q8NEM8 1001 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 TMEM117Q9H0C3 514 aa17.93■□□□□ 0.46
PDAP1-201ENST00000350498 ZBTB7AO95365 584 aa17.92■□□□□ 0.46
PDAP1-201ENST00000350498 MYZAPP0CAP1 466 aa17.92■□□□□ 0.46
PDAP1-201ENST00000350498 CIAPIN1Q6FI81 312 aa17.92■□□□□ 0.46
PDAP1-201ENST00000350498 DLK2Q6UY11 383 aa17.92■□□□□ 0.46
PDAP1-201ENST00000350498 RPUSD2Q8IZ73 545 aaKnown RBP17.92■□□□□ 0.46
PDAP1-201ENST00000350498 DHX38Q92620 1227 aaKnown RBP17.92■□□□□ 0.46
PDAP1-201ENST00000350498 KRT35Q92764 455 aa17.92■□□□□ 0.46
PDAP1-201ENST00000350498 AGPAT1Q99943 283 aa17.92■□□□□ 0.46
PDAP1-201ENST00000350498 PDCD2LQ9BRP1 358 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms