RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 SYT11Q9BT88 431 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 SPATC1LQ9H0A9 340 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 ZNF302Q9NR11 478 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 L1RE1Q9UN81 338 aa18.12■□□□□ 0.49
SAMM50-201ENST00000350028 MAFBQ9Y5Q3 323 aaPredicted RBP18.12■□□□□ 0.49
SAMM50-201ENST00000350028 MYH9P35579 1960 aaKnown RBP18.11■□□□□ 0.49
SAMM50-201ENST00000350028 IRF6O14896 467 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 ADRB2P07550 413 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 TNFAIP3P21580 790 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 GARTP22102 1010 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 ADSSP30520 456 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 NF2P35240 595 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 NOP2P46087 812 aaKnown RBP18.11■□□□□ 0.49
SAMM50-201ENST00000350028 MXI1P50539 228 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 IRX3P78415 501 aaPredicted RBP18.11■□□□□ 0.49
SAMM50-201ENST00000350028 GABPB1Q06547 395 aaPredicted RBP18.11■□□□□ 0.49
SAMM50-201ENST00000350028 C2orf54Q08AI8 447 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 SNRNP35Q16560 246 aaKnown RBP18.11■□□□□ 0.49
SAMM50-201ENST00000350028 ARHGAP44Q17R89 818 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 CFAP221Q4G0U5 840 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 DLK2Q6UY11 383 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 CYFIP1Q7L576 1253 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 USP37Q86T82 979 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 ANKRD13AQ8IZ07 590 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 LNX1Q8TBB1 728 aaPredicted RBP18.11■□□□□ 0.49
SAMM50-201ENST00000350028 FBXL18Q96ME1 805 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 UBE2TQ9NPD8 197 aaPredicted RBP18.11■□□□□ 0.49
SAMM50-201ENST00000350028 TELO2Q9Y4R8 837 aa18.11■□□□□ 0.49
SAMM50-201ENST00000350028 GOLGA8IPA6NC78 632 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 GOLGA8JA6NMD2 632 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 CES2O00748 559 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 FTCDO95954 541 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 EDNRBP24530 442 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 GTF2H1P32780 548 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 MTERF2Q49AM1 385 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 MAP9Q49MG5 647 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 BRDTQ58F21 947 aaPredicted RBP18.1■□□□□ 0.49
SAMM50-201ENST00000350028 ZSWIM2Q8NEG5 633 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 OLIG1Q8TAK6 271 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 KCNN1Q92952 543 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 MFSD14AQ96MC6 490 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 KIFC3Q9BVG8 833 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 TMEM117Q9H0C3 514 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 POLR3FQ9H1D9 316 aaPredicted RBP18.1■□□□□ 0.49
SAMM50-201ENST00000350028 ELP3Q9H9T3 547 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 SYNGAP1Q96PV0 1343 aa18.1■□□□□ 0.49
SAMM50-201ENST00000350028 IGKV6D-21A0A0A0MT36 114 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 SOWAHBA6NEL2 793 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 FOXN3O00409 490 aaPredicted RBP18.09■□□□□ 0.49
SAMM50-201ENST00000350028 SLC25A27O95847 323 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 OATP04181 439 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 CXCR5P32302 372 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 COPB2P35606 906 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 SEPT14Q6ZU15 432 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 NCAPG2Q86XI2 1143 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 CBWD2Q8IUF1 395 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 PARD3BQ8TEW8 1205 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 TAF4BQ92750 862 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 UBXN6Q9BZV1 441 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 ARHGAP28Q9P2N2 729 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 ZC3H4Q9UPT8 1303 aaKnown RBP18.09■□□□□ 0.49
SAMM50-201ENST00000350028 GLTPD2A6NH11 291 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 SPDYE5A6NIY4 337 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 TMEM253P0C7T8 217 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 TGFB3P10600 412 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 POLGP54098 1239 aaPredicted RBP18.09■□□□□ 0.49
SAMM50-201ENST00000350028 GALCP54803 685 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 SOX10P56693 466 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 NEDD9Q14511 834 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 EMC2Q15006 297 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 RPS6KA1Q15418 735 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 KRT39Q6A163 491 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 SLC39A4Q6P5W5 647 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.09■□□□□ 0.49
SAMM50-201ENST00000350028 GLYCTKQ8IVS8 523 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 ARHGEF19Q8IW93 802 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 TPCN2Q8NHX9 752 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 POMGNT1Q8WZA1 660 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 OTUD5Q96G74 571 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 L3MBTL3Q96JM7 780 aaPredicted RBP18.09■□□□□ 0.49
SAMM50-201ENST00000350028 PSMB7Q99436 277 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 NIFKQ9BYG3 293 aaKnown RBP18.09■□□□□ 0.49
SAMM50-201ENST00000350028 TMEM8AQ9HCN3 771 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 KCNH4Q9UQ05 1017 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 COQ4Q9Y3A0 265 aa18.09■□□□□ 0.49
SAMM50-201ENST00000350028 SORBS3O60504 671 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 ATP4AP20648 1035 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 FSTL1Q12841 308 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 USP50Q70EL3 339 aaPredicted RBP18.08■□□□□ 0.48
SAMM50-201ENST00000350028 SYCE1Q8N0S2 351 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 GPD1LQ8N335 351 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 LRRC57Q8N9N7 239 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 SAAL1Q96ER3 474 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 CDCA5Q96FF9 252 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 PBKQ96KB5 322 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 MPHOSPH6Q99547 160 aaKnown RBP18.08■□□□□ 0.48
SAMM50-201ENST00000350028 AGPAT1Q99943 283 aa18.08■□□□□ 0.48
SAMM50-201ENST00000350028 ASCC2Q9H1I8 757 aaPredicted RBP18.08■□□□□ 0.48
SAMM50-201ENST00000350028 DHX33Q9H6R0 707 aaKnown RBP18.08■□□□□ 0.48
SAMM50-201ENST00000350028 KIAA1586Q9HCI6 787 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms