RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 DPH6Q7L8W6 267 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 FERMT3Q86UX7 667 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 AFAP1L1Q8TED9 768 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 DNAJC7Q99615 494 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 MTA3Q9BTC8 594 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 IER2Q9BTL4 223 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 STK31Q9BXU1 1019 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 XPO4Q9C0E2 1151 aaKnown RBP8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 SLC6A17Q9H1V8 727 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 VIPAS39Q9H9C1 493 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 PDE11AQ9HCR9 933 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 TNFRSF12AQ9NP84 129 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 IFNKQ9P0W0 207 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 RCOR1Q9UKL0 485 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 RAB21Q9UL25 225 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 KCPQ6ZWJ8 1503 aa8.63□□□□□ -1.03
UBE2D3-204ENST00000349311 TRAV20A0A0B4J274 112 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 CCDC85CA6NKD9 419 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 H3BQV1 296 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 IKBKBO14920 756 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 PPP1R12AO14974 1030 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 FAM153BP0C7A2 387 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 PABPC1P11940 636 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 PRKCAP17252 672 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 MCM3P25205 808 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 SSRP1Q08945 709 aaKnown RBP8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 YOD1Q5VVQ6 348 aaPredicted RBP8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 FOXB2Q5VYV0 432 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 TSHZ3Q63HK5 1081 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 SRGAP1Q7Z6B7 1085 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 CPNE8Q86YQ8 564 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 UNC5CLQ8IV45 518 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 Q8N1Y9 231 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 LILRB2Q8N423 598 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 CNNM3Q8NE01 707 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 KCTD13Q8WZ19 329 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 DPF3Q92784 378 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 MIS18AQ9NYP9 233 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 FAN1Q9Y2M0 1017 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 ANKRD36CQ5JPF3 1778 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 RREB1Q92766 1687 aa8.62□□□□□ -1.03
UBE2D3-204ENST00000349311 ADCY9O60503 1353 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 SPATA31A1Q5TZJ5 1347 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 GLRX3O76003 335 aaKnown RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 RDXP35241 583 aaKnown RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 ECI1P42126 302 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 GNG11P61952 73 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 IFRD2Q12894 506 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 NTRK3Q16288 839 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 BEND6Q5SZJ8 279 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 LRCH2Q5VUJ6 765 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 NAA16Q6N069 864 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 ZNF790Q6PG37 636 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 BLOC1S2Q6QNY1 142 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 GBP6Q6ZN66 633 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 SPATS2Q86XZ4 545 aaKnown RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 DHX37Q8IY37 1157 aaKnown RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 CNPY4Q8N129 248 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 NECAB1Q8N987 351 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 TBC1D22AQ8WUA7 517 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 KISS1RQ969F8 398 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 GPATCH3Q96I76 525 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 PIF1Q9H611 641 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 ZNF552Q9H707 407 aaPredicted RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 PDLIM7Q9NR12 457 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 GNL3LQ9NVN8 582 aaKnown RBP8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 HMG20BQ9P0W2 317 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 PFDN2Q9UHV9 154 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 TPCN1Q9ULQ1 816 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 PPP2R2CQ9Y2T4 447 aa8.61□□□□□ -1.03
UBE2D3-204ENST00000349311 TJP1Q07157 1748 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 SPATA31A5Q5VU36 1347 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 SPATA31A7Q8IWB4 1347 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 A0A1W2PQ27 194 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 A0A1W2PQ64 194 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 A0A1W2PQD8 194 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 VWA3AA6NCI4 1184 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 A6NNZ2 444 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 HRKO00198 91 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 EBAG9O00559 213 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 HNRNPH1P31943 449 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 AARSP49588 968 aaKnown RBP eCLIP8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 YBX1P67809 324 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 CYP4F8P98187 520 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 DDR1Q08345 913 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 MESP2Q0VG99 397 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 KRT32Q14532 448 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 TUBB8Q3ZCM7 444 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 MAP9Q49MG5 647 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 ZC3H12BQ5HYM0 836 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 FAM173BQ6P4H8 233 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 PRR23BQ6ZRT6 265 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 JAMLQ86YT9 394 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 EGFL6Q8IUX8 553 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 FSIP1Q8NA03 581 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 NUP43Q8NFH3 380 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 ENGASEQ8NFI3 743 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 SSH3Q8TE77 659 aa8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 MRPS27Q92552 414 aaKnown RBP8.6□□□□□ -1.03
UBE2D3-204ENST00000349311 LLPHQ9BRT6 129 aaKnown RBP8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms