RNA–Protein interactions for RNA: ENST00000349228.8

TNFSF13-202, Transcript of TNF superfamily member 13, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13, Length 2,036 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13-202ENST00000349228 PPP1R9AQ9ULJ8 1098 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 MTA2O94776 668 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 ABCB4P21439 1286 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 YWHABP31946 246 aaKnown RBP16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 DRG2P55039 364 aaKnown RBP16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 NCKAP1LP55160 1127 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 PSMC5P62195 406 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 TRADDQ15628 312 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 CEP85LQ5SZL2 805 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 AGBL2Q5U5Z8 902 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 DNAAF5Q86Y56 855 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 RDH13Q8NBN7 331 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 RNPC3Q96LT9 517 aaKnown RBP16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 TRERF1Q96PN7 1200 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 THAP2Q9H0W7 228 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 AMACRQ9UHK6 382 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 ZNRF3Q9ULT6 936 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 SAMM50Q9Y512 469 aa16.72■□□□□ 0.27
TNFSF13-202ENST00000349228 H0YGN5 161 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 DDX39AO00148 427 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 ITGA4P13612 1032 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 EIF3BP55884 814 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 KRT76Q01546 638 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 ITGB3BPQ13352 177 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 MIGA2Q7L4E1 593 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 USP37Q86T82 979 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 SYTL5Q8TDW5 730 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 ZNF341Q9BYN7 854 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 SEPT11Q9NVA2 429 aaKnown RBP16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 COL20A1Q9P218 1284 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 NFS1Q9Y697 457 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 SYNGAP1Q96PV0 1343 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 RGPD3A6NKT7 1758 aaPredicted RBP16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 RGPD4Q7Z3J3 1758 aa16.71■□□□□ 0.27
TNFSF13-202ENST00000349228 FTLP02792 175 aaPredicted RBP16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 CTNNA1P35221 906 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 SMTNP53814 917 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 MFAP3P55082 362 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 PPP3CAQ08209 521 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 C10orf67Q8IYJ2 551 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 PPM1EQ8WY54 764 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 ARHGEF26Q96DR7 871 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 RUNDC3BQ96NL0 473 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 EPN3Q9H201 632 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 PLEKHA4Q9H4M7 779 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 C17orf75Q9HAS0 396 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 SLC38A10Q9HBR0 1119 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 STK32BQ9NY57 414 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 RASAL2Q9UJF2 1139 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 ATXN2Q99700 1313 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 WDR64B1ANS9 1081 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 NFIBO00712 420 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 DAPK3O43293 454 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 DKC1O60832 514 aaKnown RBP eCLIP16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 GTF2H1P32780 548 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 CCT5P48643 541 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 MXI1P50539 228 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 MRPS9P82933 396 aaKnown RBP16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 KCTD16Q68DU8 428 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 FAM71AQ8IYT1 594 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 WNT8AQ9H1J5 351 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 PCIF1Q9H4Z3 704 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 CTTNBP2NLQ9P2B4 639 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 ALG6Q9Y672 507 aa16.7■□□□□ 0.26
TNFSF13-202ENST00000349228 IGSF9BQ9UPX0 1349 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 A0A087WUV0 522 aaPredicted RBP16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 MAFGO15525 162 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 TTI1O43156 1089 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 ABCD1P33897 745 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 MDH1P40925 334 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 DLG4P78352 724 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 DR1Q01658 176 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 RASA3Q14644 834 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 C1orf220Q5T0J3 134 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 NIM1KQ8IY84 436 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 SH2D3CQ8N5H7 860 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 C3orf20Q8ND61 904 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 TMC2Q8TDI7 906 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 FAM81BQ96LP2 452 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 CBWD1Q9BRT8 395 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 ERP44Q9BS26 406 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 PAGR1Q9BTK6 254 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 GLIS2Q9BZE0 524 aaPredicted RBP16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 COQ4Q9Y3A0 265 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 CTDP1Q9Y5B0 961 aaPredicted RBP16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 PHF20L1A8MW92 1017 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 ZBED4O75132 1171 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 LRRN2O75325 713 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 ALAS1P13196 640 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 CHRNA3P32297 505 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 LSP1P33241 339 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 GCLMP48507 274 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 UAP1Q16222 522 aaPredicted RBP16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 DUPD1Q68J44 220 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 MICALCLQ6ZW33 695 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 TMC3Q7Z5M5 1100 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 ARHGEF19Q8IW93 802 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 RPUSD2Q8IZ73 545 aaKnown RBP16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 IL31RAQ8NI17 732 aa16.69■□□□□ 0.26
TNFSF13-202ENST00000349228 ZNF526Q8TF50 670 aaPredicted RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms