RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 BZW2Q9Y6E2 419 aaKnown RBP20.08■□□□□ 0.8
SCARF1-202ENST00000348987 POTEFA5A3E0 1075 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 POTEIP0CG38 1075 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 ADAM9Q13443 819 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 CWF19L1Q69YN2 538 aaKnown RBP20.07■□□□□ 0.8
SCARF1-202ENST00000348987 POTEGQ6S5H5 508 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 POTEEQ6S8J3 1075 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 SPATA21Q7Z572 469 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 GPBP1Q86WP2 473 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 UTP4Q969X6 686 aaKnown RBP20.07■□□□□ 0.8
SCARF1-202ENST00000348987 PIDD1Q9HB75 910 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 ETNK1Q9HBU6 452 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 CNOT7Q9UIV1 285 aaKnown RBP20.07■□□□□ 0.8
SCARF1-202ENST00000348987 ATF5Q9Y2D1 282 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-202ENST00000348987 MED24O75448 989 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 GJB6O95452 261 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 GNA14O95837 355 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 FERP16591 822 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 TRAF1Q13077 416 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 ARSHQ5FYA8 562 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 U2AF1L4Q8WU68 220 aaKnown RBP20.07■□□□□ 0.8
SCARF1-202ENST00000348987 GRHL1Q9NZI5 618 aa20.07■□□□□ 0.8
SCARF1-202ENST00000348987 TTC7AQ9ULT0 858 aaPredicted RBP20.07■□□□□ 0.8
SCARF1-202ENST00000348987 KRT13P13646 458 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 GNAZP19086 355 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 CYP11B2P19099 503 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 HOXA10P31260 410 aaPredicted RBP20.06■□□□□ 0.8
SCARF1-202ENST00000348987 PSMC6P62333 389 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 MXRA7P84157 204 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 RNASELQ05823 741 aaKnown RBP20.06■□□□□ 0.8
SCARF1-202ENST00000348987 QRICH1Q2TAL8 776 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 LRRC42Q9Y546 428 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 LRRD1A4D1F6 860 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 FOXO6A8MYZ6 492 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 MEIS1O00470 390 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 DDX3YO15523 660 aaKnown RBP20.06■□□□□ 0.8
SCARF1-202ENST00000348987 PCK1P35558 622 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 MARSP56192 900 aaKnown RBP20.06■□□□□ 0.8
SCARF1-202ENST00000348987 MGAT5Q09328 741 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 TCP10Q12799 353 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 TNFAIP8L3Q5GJ75 292 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 DPY19L2P1Q6NXN4 242 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 FOXR2Q6PJQ5 311 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 ANKRD42Q8N9B4 389 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 GDAP1Q8TB36 358 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 C18orf8Q96DM3 657 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 KCTD10Q9H3F6 313 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 DBNDD1Q9H9R9 158 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 PCDHA1Q9Y5I3 950 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 TMEM120BA0PK00 339 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 DDX3XO00571 662 aaKnown RBP eCLIP20.06■□□□□ 0.8
SCARF1-202ENST00000348987 RIPK2O43353 540 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 GALCP54803 685 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 MAPK7Q13164 816 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 APOBEC3HQ6NTF7 200 aaKnown RBP20.06■□□□□ 0.8
SCARF1-202ENST00000348987 AADACL2Q6P093 401 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 SYT15Q9BQS2 421 aa20.06■□□□□ 0.8
SCARF1-202ENST00000348987 STMN4Q9H169 189 aaPredicted RBP20.06■□□□□ 0.8
SCARF1-202ENST00000348987 RPL21P46778 160 aaKnown RBP20.05■□□□□ 0.8
SCARF1-202ENST00000348987 LONRF1Q17RB8 773 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 PPP1R18Q6NYC8 613 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 ZC3H12CQ9C0D7 883 aaKnown RBP20.05■□□□□ 0.8
SCARF1-202ENST00000348987 BMP2KQ9NSY1 1161 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-202ENST00000348987 EMILIN3Q9NT22 766 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 AJAP1Q9UKB5 411 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-202ENST00000348987 A0A0A6YYK5 440 aaPredicted RBP20.05■□□□□ 0.8
SCARF1-202ENST00000348987 FAM187AA6NFU0 413 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 O00370 1275 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 CCNB1P14635 433 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 GBP1P32455 592 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 RAD23BP54727 409 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 HYIQ5T013 277 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 GPATCH4Q5T3I0 446 aaKnown RBP20.05■□□□□ 0.8
SCARF1-202ENST00000348987 SLC35G2Q8TBE7 412 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 TRIM7Q9C029 511 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 LRRC27Q9C0I9 530 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 PRKAG3Q9UGI9 489 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 HDAC9Q9UKV0 1011 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 NENFQ9UMX5 172 aa20.05■□□□□ 0.8
SCARF1-202ENST00000348987 RTN3O95197 1032 aaPredicted RBP20.04■□□□□ 0.8
SCARF1-202ENST00000348987 PON1P27169 355 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 MFN1Q8IWA4 741 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 ANKLE1Q8NAG6 615 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 TEKT4Q8WW24 435 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 KCNK9Q9NPC2 374 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 IRAK4Q9NWZ3 460 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 UNC5CO95185 931 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 GH1P01241 217 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 ABCB4P21439 1286 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 ROR2Q01974 943 aaKnown RBP20.04■□□□□ 0.8
SCARF1-202ENST00000348987 GJB7Q6PEY0 223 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 BTNL9Q6UXG8 535 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 FBF1Q8TES7 1133 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 ARHGEF2Q92974 986 aaKnown RBP20.04■□□□□ 0.8
SCARF1-202ENST00000348987 CRAMP1Q96RY5 1269 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 ANO3Q9BYT9 981 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 RNPEPL1Q9HAU8 725 aa20.04■□□□□ 0.8
SCARF1-202ENST00000348987 WFS1O76024 890 aa20.03■□□□□ 0.8
SCARF1-202ENST00000348987 EEF2P13639 858 aaKnown RBP20.03■□□□□ 0.8
SCARF1-202ENST00000348987 CALB2P22676 271 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms