RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PCIF1Q9H4Z3 704 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 SIX2Q9NPC8 291 aa23.09■■□□□ 1.29
PTPN18-202ENST00000347849 RBAK-RBAKDNI3L0D1 243 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 TRIM49P0CI25 452 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 TRIM49CP0CI26 452 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 PSMC2P35998 433 aaKnown RBP23.08■■□□□ 1.29
PTPN18-202ENST00000347849 JAK3P52333 1124 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 NAB2Q15742 525 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 KCNV1Q6PIU1 500 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 SYCP3Q8IZU3 236 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 OTUD5Q96G74 571 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 KIFC3Q9BVG8 833 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 EPN3Q9H201 632 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 METTL14Q9HCE5 456 aaKnown RBP23.08■■□□□ 1.29
PTPN18-202ENST00000347849 GABBR1Q9UBS5 961 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 TCEAL9Q9UHQ7 104 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 WDR90Q96KV7 1748 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 SERPING1P05155 500 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 UCHL3P15374 230 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 NR1D1P20393 614 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 SEC24CP53992 1094 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 HS2ST1Q7LGA3 356 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 RBM46Q8TBY0 533 aaKnown RBP23.08■■□□□ 1.29
PTPN18-202ENST00000347849 LARSQ9P2J5 1176 aaKnown RBP23.08■■□□□ 1.29
PTPN18-202ENST00000347849 PCDHA10Q9Y5I2 948 aa23.08■■□□□ 1.29
PTPN18-202ENST00000347849 H0YHG0 523 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 MEFVO15553 781 aaPredicted RBP23.07■■□□□ 1.28
PTPN18-202ENST00000347849 PLS3P13797 630 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 PEX3P56589 373 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 PPARDQ03181 441 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 XRRA1Q6P2D8 792 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 KLHL7Q8IXQ5 586 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 MYH11P35749 1972 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 MYO1FO00160 1098 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 SLC16A4O15374 487 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 STBD1O95210 358 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 SFNP31947 248 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 NFIL3Q16649 462 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 CBWD6Q4V339 395 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 CBWD3Q5JTY5 395 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 CBWD5Q5RIA9 395 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 NAA35Q5VZE5 725 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 SWSAP1Q6NVH7 229 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 LBX2Q6XYB7 198 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 GADL1Q6ZQY3 521 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 ZNF526Q8TF50 670 aaPredicted RBP23.07■■□□□ 1.28
PTPN18-202ENST00000347849 CEP89Q96ST8 783 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 CSADQ9Y600 493 aa23.07■■□□□ 1.28
PTPN18-202ENST00000347849 DOCK5Q9H7D0 1870 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 KIAA0753Q2KHM9 967 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 FAM102BQ5T8I3 360 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 MEI1Q5TIA1 1274 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 MAATS1Q7Z4T9 603 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 CBWD1Q9BRT8 395 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 PACSIN1Q9BY11 444 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 GCNT4Q9P109 453 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 ADAMTS1Q9UHI8 967 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 PPP1R12BO60237 982 aaPredicted RBP23.06■■□□□ 1.28
PTPN18-202ENST00000347849 SWT1Q5T5J6 900 aaKnown RBP23.06■■□□□ 1.28
PTPN18-202ENST00000347849 ZNF746Q6NUN9 644 aaPredicted RBP23.06■■□□□ 1.28
PTPN18-202ENST00000347849 CCDC60Q8IWA6 550 aaPredicted RBP23.06■■□□□ 1.28
PTPN18-202ENST00000347849 MREGQ8N565 214 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 ATP6V1G3Q96LB4 118 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 LUC7LQ9NQ29 371 aaKnown RBP23.06■■□□□ 1.28
PTPN18-202ENST00000347849 UBE4BO95155 1302 aa23.06■■□□□ 1.28
PTPN18-202ENST00000347849 A0A087X0T9 212 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 RAD51CO43502 376 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 FAM228BP0C875 321 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 CEP85LQ5SZL2 805 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 STXBP4Q6ZWJ1 553 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 HAUS6Q7Z4H7 955 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 DNAAF5Q86Y56 855 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 CD302Q8IX05 232 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 ZNF473Q8WTR7 871 aaKnown RBP23.05■■□□□ 1.28
PTPN18-202ENST00000347849 SYN2Q92777 582 aaPredicted RBP23.05■■□□□ 1.28
PTPN18-202ENST00000347849 CENPHQ9H3R5 247 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 PLCB1Q9NQ66 1216 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 LCTP09848 1927 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 KIAA1217Q5T5P2 1943 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 DLG4P78352 724 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 PTGISQ16647 500 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 IRF2BP2Q7Z5L9 587 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 ANKRD35Q8N283 1001 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 BSNDQ8WZ55 320 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 CCT8L2Q96SF2 557 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 NUCKS1Q9H1E3 243 aaKnown RBP23.05■■□□□ 1.28
PTPN18-202ENST00000347849 JPH1Q9HDC5 661 aaPredicted RBP23.05■■□□□ 1.28
PTPN18-202ENST00000347849 AIPL1Q9NZN9 384 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 PLAAQ9Y263 795 aa23.05■■□□□ 1.28
PTPN18-202ENST00000347849 OTOFQ9HC10 1997 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 GRID2IPA4D2P6 1211 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 EXOC3O60645 756 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 MDH1P40925 334 aaKnown RBP23.04■■□□□ 1.28
PTPN18-202ENST00000347849 SLC18A3Q16572 532 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 CNPY4Q8N129 248 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 WHAMMQ8TF30 809 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 SENP7Q9BQF6 1050 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 MYPNQ86TC9 1320 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 SPATA31C2B4DYI2 1134 aa23.04■■□□□ 1.28
PTPN18-202ENST00000347849 LRRN2O75325 713 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms