RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 RFX1P22670 979 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MXI1P50539 228 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MCCD1P59942 119 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 KCTD2Q14681 263 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 BMS1Q14692 1282 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ARHGAP44Q17R89 818 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 EPC2Q52LR7 807 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 BRDTQ58F21 947 aaPredicted RBP15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 WDR78Q5VTH9 848 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 METTL7BQ6UX53 244 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TAS1R3Q7RTX0 852 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CCDC127Q96BQ5 260 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MMP19Q99542 508 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MPHOSPH6Q99547 160 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 NIFKQ9BYG3 293 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TMEM117Q9H0C3 514 aa15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 DDX41Q9UJV9 622 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP1-202ENST00000346416 DNAJC25-GNG10A0A024R161 153 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 H0YCG3 227 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TULP1O00294 542 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 DDX3XO00571 662 aaKnown RBP eCLIP15.32■□□□□ 0.041e-6■■■■□ 19.7
CDK5RAP1-202ENST00000346416 PRLRP16471 622 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 STAT5BP51692 787 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CKAP4Q07065 602 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SNAPC2Q13487 334 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GPR162Q16538 588 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TMCO3Q6UWJ1 677 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 DNAAF5Q86Y56 855 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PARD3BQ8TEW8 1205 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SLC7A3Q8WY07 619 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SLC10A4Q96EP9 437 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 BICD1Q96G01 975 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FBXL18Q96ME1 805 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CEP89Q96ST8 783 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PORCNQ9H237 461 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 KCNG1Q9UIX4 513 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 NENFQ9UMX5 172 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 LRRC37A2A6NM11 1700 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SPDYE4A6NLX3 237 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PMM2O15305 246 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ARIH2O95376 493 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TCF7P36402 384 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FMNL3Q8IVF7 1028 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SEPT1Q8WYJ6 367 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TLR10Q9BXR5 811 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 UBE2TQ9NPD8 197 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ZC3H4Q9UPT8 1303 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SCN4AP35499 1836 aa15.32■□□□□ 0.04
CDK5RAP1-202ENST00000346416 BTNL10A8MVZ5 291 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PDE2AO00408 941 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FOXN3O00409 490 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 NCK2O43639 380 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PALMO75781 387 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 RHOXF2BP0C7M4 288 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ABCD1P33897 745 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ERVK-9P63128 1117 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 FAM160B1Q5W0V3 765 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 NFRKBQ6P4R8 1299 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PNMA8AQ86V59 439 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CREG2Q8IUH2 290 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ARHGEF19Q8IW93 802 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MSANTD4Q8NCY6 345 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CAGE1Q8TC20 777 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ASAP3Q8TDY4 903 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 AFAP1L1Q8TED9 768 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 COG1Q8WTW3 980 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 OSBPL9Q96SU4 736 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 POP1Q99575 1024 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 RHOXF2Q9BQY4 288 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MROH8Q9H579 483 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ZNF408Q9H9D4 720 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 NRBP2Q9NSY0 501 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PCDHGC5Q9Y5F6 944 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CCDC172P0C7W6 258 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CYP2C8P10632 490 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TCP1P17987 556 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GARTP22102 1010 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GLRA2P23416 452 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ARL2P36404 184 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MAP2K1Q02750 393 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 TARBP2Q15633 366 aaKnown RBP15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 GLYCTKQ8IVS8 523 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 SLC30A5Q8TAD4 765 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 OLIG1Q8TAK6 271 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 LNX1Q8TBB1 728 aaPredicted RBP15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 RPGRIP1Q96KN7 1286 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MFSD14AQ96MC6 490 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PNKPQ96T60 521 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 PSMB7Q99436 277 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CLEC11AQ9Y240 323 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 HYOU1Q9Y4L1 999 aa15.31■□□□□ 0.04
CDK5RAP1-202ENST00000346416 MCM3APO60318 1980 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 LRRIQ3A6PVS8 624 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 ZRANB2O95218 330 aaKnown RBP eCLIP15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 POTEJP0CG39 1038 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CXCR5P32302 372 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 RFC5P40937 340 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 CYP24A1Q07973 514 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 HSDL1Q3SXM5 330 aa15.3■□□□□ 0.04
CDK5RAP1-202ENST00000346416 KRT39Q6A163 491 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms