RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 ERFP50548 548 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 C1orf146Q5VVC0 180 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 ARHGAP27Q6ZUM4 889 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 CLEC10AQ8IUN9 316 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 SRRM1Q8IYB3 904 aaKnown RBP16.53■□□□□ 0.24
SRPK1-201ENST00000346162 PPP4R1Q8TF05 950 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 FAM161BQ96MY7 647 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 CCDC68Q9H2F9 335 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 FGFR1OP2Q9NVK5 253 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 DNAJC17Q9NVM6 304 aaKnown RBP16.53■□□□□ 0.24
SRPK1-201ENST00000346162 HESX1Q9UBX0 185 aa16.53■□□□□ 0.24
SRPK1-201ENST00000346162 SLIT1O75093 1534 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 RHOBTB3O94955 611 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 ST3GAL1Q11201 340 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 RBM43Q6ZSC3 357 aaKnown RBP16.52■□□□□ 0.24
SRPK1-201ENST00000346162 KLHL23Q8NBE8 558 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 DCPSQ96C86 337 aaKnown RBP16.52■□□□□ 0.24
SRPK1-201ENST00000346162 PDP2Q9P2J9 529 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 SSX2IPQ9Y2D8 614 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 FGGP02679 453 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 PMS2P54278 862 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 AP2B1P63010 937 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 STK4Q13043 487 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 KRT81Q14533 505 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 SUPT20HL1Q3ZLR7 823 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 PDXDC2PQ6P474 469 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 INTS5Q6P9B9 1019 aaKnown RBP16.52■□□□□ 0.24
SRPK1-201ENST00000346162 PADI6Q6TGC4 694 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 RASSF3Q86WH2 238 aa16.52■□□□□ 0.24
SRPK1-201ENST00000346162 MYBL2P10244 700 aa16.52■□□□□ 0.23
SRPK1-201ENST00000346162 CCNHP51946 323 aaPredicted RBP16.52■□□□□ 0.23
SRPK1-201ENST00000346162 SPARCL1Q14515 664 aa16.52■□□□□ 0.23
SRPK1-201ENST00000346162 RNF207Q6ZRF8 634 aa16.52■□□□□ 0.23
SRPK1-201ENST00000346162 LCA5Q86VQ0 697 aa16.52■□□□□ 0.23
SRPK1-201ENST00000346162 MRPL46Q9H2W6 279 aaKnown RBP16.52■□□□□ 0.23
SRPK1-201ENST00000346162 MCF2LO15068 1137 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 HAUS5O94927 633 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 RHOT2Q8IXI1 618 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 C3orf20Q8ND61 904 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 CRAMP1Q96RY5 1269 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 IFT122Q9HBG6 1241 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 TRAF3IP3Q9Y228 551 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 PABPN1LA6NDY0 278 aaKnown RBP16.51■□□□□ 0.23
SRPK1-201ENST00000346162 PSMD14O00487 310 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 TPD52L2O43399 206 aaKnown RBP16.51■□□□□ 0.23
SRPK1-201ENST00000346162 ECEL1O95672 775 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 FAM200BP0CF97 657 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 MED21Q13503 144 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 MTMR1Q13613 665 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 PPP2R5DQ14738 602 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 ANKRD20A4Q4UJ75 823 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 ANKRD20A8PQ5CZ79 823 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 ANKRD20A2Q5SQ80 823 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 ANKRD20A1Q5TYW2 823 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 BSPRYQ5W0U4 402 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 TRIM42Q8IWZ5 723 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 RMDN3Q96TC7 470 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 MYO3BQ8WXR4 1341 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 ZNF189O75820 626 aaPredicted RBP16.51■□□□□ 0.23
SRPK1-201ENST00000346162 PSAPP07602 524 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 FGFR2P21802 821 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 ROR2Q01974 943 aaKnown RBP16.51■□□□□ 0.23
SRPK1-201ENST00000346162 EAPPQ56P03 285 aaPredicted RBP16.51■□□□□ 0.23
SRPK1-201ENST00000346162 LRIG3Q6UXM1 1119 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 TAB3Q8N5C8 712 aaPredicted RBP16.51■□□□□ 0.23
SRPK1-201ENST00000346162 XXYLT1Q8NBI6 393 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 CARD9Q9H257 536 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 MCM8Q9UJA3 840 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 AHCYL1O43865 530 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 LMNB2Q03252 620 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 TFDP1Q14186 410 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 EDEM3Q9BZQ6 932 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 DCTN4Q9UJW0 460 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 MYOM1P52179 1685 aa16.51■□□□□ 0.23
SRPK1-201ENST00000346162 VPS72Q15906 364 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 C16orf86Q6ZW13 317 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 KDM1AO60341 852 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 COPS2P61201 443 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 TFAMQ00059 246 aaKnown RBP16.5■□□□□ 0.23
SRPK1-201ENST00000346162 LRGUKQ96M69 825 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 C7orf25Q9BPX7 421 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 MRPL47Q9HD33 250 aaKnown RBP16.5■□□□□ 0.23
SRPK1-201ENST00000346162 SMARCAL1Q9NZC9 954 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 MAGEA13PA6NCF6 341 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 ZNF233A6NK53 670 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 K7ERI5 159 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 ABCD1P33897 745 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 GCLMP48507 274 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 FAM81AQ8TBF8 368 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 GRAMD1AQ96CP6 724 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 MAP3K14Q99558 947 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 PDS5AQ29RF7 1337 aaKnown RBP16.5■□□□□ 0.23
SRPK1-201ENST00000346162 EXOC1LA0A1B0GW35 172 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 CFAP69A5D8W1 941 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 SUPT3HO75486 399 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 EEF1DP29692 281 aaKnown RBP16.5■□□□□ 0.23
SRPK1-201ENST00000346162 PSEN1P49768 467 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 DDR1Q08345 913 aa16.5■□□□□ 0.23
SRPK1-201ENST00000346162 ELOA2Q8IYF1 753 aaPredicted RBP16.5■□□□□ 0.23
SRPK1-201ENST00000346162 PROCA1Q8NCQ7 364 aaPredicted RBP16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms