RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 FAM160B1Q5W0V3 765 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 SLC35G2Q8TBE7 412 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 MDM1Q8TC05 714 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 HIC2Q96JB3 615 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 TMEM47Q9BQJ4 181 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 ERP44Q9BS26 406 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 ZC4H2Q9NQZ6 224 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 CYP26B1Q9NR63 512 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 MYO5CQ9NQX4 1742 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 GALCP54803 685 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 LRRC36Q1X8D7 754 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 SYDE2Q5VT97 1194 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 OLFML2BQ68BL8 750 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 HACE1Q8IYU2 909 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 LRRC34Q8IZ02 419 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 RAPGEF5Q92565 580 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 SCHIP1Q9P0W5 487 aaPredicted RBP18.55■□□□□ 0.56
SPAST-202ENST00000345662 CHEK2O96017 543 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 MTBPQ96DY7 904 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 AGPAT1Q99943 283 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 POLR1AO95602 1720 aaPredicted RBP18.55■□□□□ 0.56
SPAST-202ENST00000345662 CTDNEP1O95476 244 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 SCP2P22307 547 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 NEK2P51955 445 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 ERVK-24P63145 666 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 USP49Q70CQ1 688 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 SUN2Q9UH99 717 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 L3MBTL1Q9Y468 752 aa18.55■□□□□ 0.56
SPAST-202ENST00000345662 ADGRL3Q9HAR2 1447 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 UBTFL6P0CB48 400 aaPredicted RBP18.54■□□□□ 0.56
SPAST-202ENST00000345662 PEX3P56589 373 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 PSMC1P62191 440 aaKnown RBP18.54■□□□□ 0.56
SPAST-202ENST00000345662 GRM4Q14833 912 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 HIF1AQ16665 826 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 KIAA0825Q8IV33 1275 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 ANKS1AQ92625 1134 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 ALKBH8Q96BT7 664 aaKnown RBP18.54■□□□□ 0.56
SPAST-202ENST00000345662 ASAP1Q9ULH1 1129 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 MAGEA13PA6NCF6 341 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 ARSEP51690 589 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 VAMP7P51809 220 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 ALDH18A1P54886 795 aaKnown RBP18.54■□□□□ 0.56
SPAST-202ENST00000345662 NAIF1Q69YI7 327 aaPredicted RBP18.54■□□□□ 0.56
SPAST-202ENST00000345662 TBC1D23Q9NUY8 699 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 IP6K2Q9UHH9 426 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 PRR36Q9H6K5 1346 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 GSG1L2A8MUP6 293 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 PAPD7Q5XG87 772 aaKnown RBP18.54■□□□□ 0.56
SPAST-202ENST00000345662 VPS39Q96JC1 886 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 RBM15Q96T37 977 aaKnown RBP eCLIP18.54■□□□□ 0.56
SPAST-202ENST00000345662 PHF20Q9BVI0 1012 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 ATP6V0A4Q9HBG4 840 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 SURF1Q15526 300 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 MYLK4Q86YV6 388 aaPredicted RBP18.54■□□□□ 0.56
SPAST-202ENST00000345662 C8orf37Q96NL8 207 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 C7orf25Q9BPX7 421 aa18.54■□□□□ 0.56
SPAST-202ENST00000345662 PASD1Q8IV76 773 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 CASKIN2Q8WXE0 1202 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 KDM4CQ9H3R0 1056 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 PPCSQ9HAB8 311 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 STX18Q9P2W9 335 aaKnown RBP18.53■□□□□ 0.56
SPAST-202ENST00000345662 NMT2O60551 498 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 ALDH1B1P30837 517 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 ATICP31939 592 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 GIMAP8Q8ND71 665 aaPredicted RBP18.53■□□□□ 0.56
SPAST-202ENST00000345662 NGRNQ9NPE2 291 aaKnown RBP18.53■□□□□ 0.56
SPAST-202ENST00000345662 SEL1LQ9UBV2 794 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 RAB21Q9UL25 225 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 TFR2Q9UP52 801 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 RTN2O75298 545 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 PRLRP16471 622 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 SLC29A2Q14542 456 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 EFTUD2Q15029 972 aaKnown RBP eCLIP18.53■□□□□ 0.562e-6■■■□□ 17.4
SPAST-202ENST00000345662 COL23A1Q86Y22 540 aaPredicted RBP18.53■□□□□ 0.56
SPAST-202ENST00000345662 DHX38Q92620 1227 aaKnown RBP18.53■□□□□ 0.56
SPAST-202ENST00000345662 ZFATQ9P243 1243 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 NCAPD2Q15021 1401 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 FAM205CA6NFA0 338 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 PPP1R3GB7ZBB8 358 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 CDO1Q16878 200 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 PPP1R18Q6NYC8 613 aa18.53■□□□□ 0.56
SPAST-202ENST00000345662 MTO1Q9Y2Z2 717 aaKnown RBP18.53■□□□□ 0.56
SPAST-202ENST00000345662 ERVV-1B6SEH8 477 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 CYP2D6P10635 497 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 USP11P51784 963 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 KPNB1Q14974 876 aaKnown RBP18.52■□□□□ 0.56
SPAST-202ENST00000345662 BARGINQ6ZT62 677 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 C4orf33Q8N1A6 199 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 C9orf72Q96LT7 481 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 FAM20AQ96MK3 541 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 CELF4Q9BZC1 486 aaKnown RBP18.52■□□□□ 0.56
SPAST-202ENST00000345662 TMBIM4Q9HC24 238 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 GTSE1Q9NYZ3 720 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 STRIP2Q9ULQ0 834 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 SUPT3HO75486 399 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 OATP04181 439 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 SLFN12LQ6IEE8 588 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 HPS3Q969F9 1004 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 IVNS1ABPQ9Y6Y0 642 aa18.52■□□□□ 0.56
SPAST-202ENST00000345662 PDXKO00764 312 aa18.52■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms