RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 ENC1O14682 589 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 PENKP01210 267 aaPredicted RBP8.2□□□□□ -1.1
LIN28B-201ENST00000345080 PRLRP16471 622 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 GSTT1P30711 240 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 KLHL30Q0D2K2 578 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 SPIDRQ14159 915 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 DEFB115Q30KQ5 88 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 KIAA1841Q6NSI8 718 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 TYW1BQ6NUM6 668 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 RASSF3Q86WH2 238 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 UBE2OQ9C0C9 1292 aaKnown RBP8.2□□□□□ -1.1
LIN28B-201ENST00000345080 CACYBPQ9HB71 228 aaKnown RBP8.2□□□□□ -1.1
LIN28B-201ENST00000345080 MOSPD1Q9UJG1 213 aa8.2□□□□□ -1.1
LIN28B-201ENST00000345080 A0A1B0GW55 424 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 CFLARO15519 480 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 XPOTO43592 962 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ATP6V1G1O75348 118 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DUX4L2P0CJ85 424 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DUX4L3P0CJ86 424 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DUX4L4P0CJ87 422 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DUX4L5P0CJ88 424 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DUX4L6P0CJ89 424 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DUX4L7P0CJ90 424 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 SCG2P13521 617 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 CCNCP24863 283 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 FNTAP49354 379 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 XRCC4Q13426 336 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 KRT25Q7Z3Z0 450 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ROPN1BQ9BZX4 212 aaPredicted RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DPH5Q9H2P9 285 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ROPN1Q9HAT0 212 aaPredicted RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 PIDD1Q9HB75 910 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 METTL14Q9HCE5 456 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DUX4Q9UBX2 424 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DPP7Q9UHL4 492 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 AP4S1Q9Y587 144 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 TYW5A2RUC4 315 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 NEURL1BA8MQ27 555 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 A8MXQ7 604 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 BAIAP3O94812 1187 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 SLC5A9Q2M3M2 681 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 THEMIS2Q5TEJ8 643 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 C1orf131Q8NDD1 294 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 VPS50Q96JG6 964 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 QKIQ96PU8 341 aaKnown RBP eCLIP8.19□□□□□ -1.12e-9■■■■■ 31.1
LIN28B-201ENST00000345080 GINS4Q9BRT9 223 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DNAAF2Q9NVR5 837 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ESYT2A0FGR8 921 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ZNF839A8K0R7 811 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 MATN2O00339 956 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 CASP2P42575 452 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 MDM2Q00987 491 aaPredicted RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 CHADLQ6NUI6 762 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 STAG2Q8N3U4 1231 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ARRDC4Q8NCT1 418 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 TBATAQ96M53 351 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 PNKPQ96T60 521 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 NDNQ99608 321 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DBNDD2Q9BQY9 259 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 TRIM15Q9C019 465 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 CAAP1Q9H8G2 361 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 TBCCD1Q9NVR7 557 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ZMYND8Q9ULU4 1186 aaPredicted RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ATP8B3O60423 1300 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 GPAA1O43292 621 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 SMNDC1O75940 238 aaKnown RBP eCLIP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 OATP04181 439 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 MAP4P27816 1152 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 RAPGEF1Q13905 1077 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 CTTNQ14247 550 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 TRIM25Q14258 630 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 CCDC14Q49A88 953 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 MTHFD1LQ6UB35 978 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 PEX5LQ8IYB4 626 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 PSPC1Q8WXF1 523 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 EPC1Q9H2F5 836 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 NHEJ1Q9H9Q4 299 aaPredicted RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 TMBIM4Q9HC24 238 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 SLC39A2Q9NP94 309 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 MAN1B1Q9UKM7 699 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ITM2BQ9Y287 266 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 PCDHA13Q9Y5I0 950 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 A0A1W2PQC6 194 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 SLC26A4O43511 780 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 WDR47O94967 919 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 MFN2O95140 757 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DLGAP3O95886 979 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 POTEIP0CG38 1075 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 VCPP55072 806 aaKnown RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ANO4Q32M45 955 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ATG16L1Q676U5 607 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ZNF790Q6PG37 636 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 FMR1NBQ8N0W7 255 aaPredicted RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 URGCPQ8TCY9 931 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 DHTKD1Q96HY7 919 aaPredicted RBP8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ZIM3Q96PE6 472 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 SYBUQ9NX95 663 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 ZNF212Q9UDV6 495 aa8.19□□□□□ -1.1
LIN28B-201ENST00000345080 PRR23D1E9PI22 279 aaPredicted RBP8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms