RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 C1orf112Q9NSG2 853 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 PRMT7Q9NVM4 692 aaPredicted RBP13.06□□□□□ -0.32
SNCA-202ENST00000345009 SEL1LQ9UBV2 794 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 HPSEQ9Y251 543 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 TRIOBPQ9H2D6 2365 aa13.06□□□□□ -0.32
SNCA-202ENST00000345009 ZNF202O95125 648 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 SKIP12755 728 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 IDEP14735 1019 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 AXLP30530 894 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 NPTX2P47972 431 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 NDUFA8P51970 172 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 UBE2HP62256 183 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 FAM160A1Q05DH4 1040 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 STRN3Q13033 797 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 GIT2Q14161 759 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 DYMQ7RTS9 669 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 APBB1IPQ7Z5R6 666 aaPredicted RBP13.05□□□□□ -0.32
SNCA-202ENST00000345009 FAM228AQ86W67 206 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 TMEM87AQ8NBN3 555 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 CNNM3Q8NE01 707 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 TMEM40Q8WWA1 233 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 CCDC47Q96A33 483 aaKnown RBP13.05□□□□□ -0.32
SNCA-202ENST00000345009 SLC9A7Q96T83 725 aa13.05□□□□□ -0.32
SNCA-202ENST00000345009 TET1Q8NFU7 2136 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 NPHP3-ACAD11A0A0J9YXS1 232 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 MYMKA6NI61 221 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 SFI1A8K8P3 1242 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 ENPP3O14638 875 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 TRAK2O60296 914 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 PRPF40AO75400 957 aaKnown RBP13.04□□□□□ -0.32
SNCA-202ENST00000345009 CSDE1O75534 798 aaKnown RBP13.04□□□□□ -0.32
SNCA-202ENST00000345009 STAG3L1P0CL83 205 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 ZNF131P52739 623 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 ASIC1P78348 528 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 FAM187BQ17R55 369 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 HERC4Q5GLZ8 1057 aaPredicted RBP13.04□□□□□ -0.32
SNCA-202ENST00000345009 C9orf50Q5SZB4 431 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 CDCA2Q69YH5 1023 aaPredicted RBP13.04□□□□□ -0.32
SNCA-202ENST00000345009 CNNM4Q6P4Q7 775 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 NOTUMQ6P988 496 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 STXBP4Q6ZWJ1 553 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 SLC24A5Q71RS6 500 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 FAM178BQ8IXR5 827 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 DAW1Q8N136 415 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 ZNF687Q8N1G0 1237 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 LRRC15Q8TF66 581 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 CCDC51Q96ER9 411 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 ADAM2Q99965 735 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 C7orf25Q9BPX7 421 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 ZBED2Q9BTP6 218 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 TRIM9Q9C026 710 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 TMEM134Q9H6X4 195 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 POLD4Q9HCU8 107 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 PANK4Q9NVE7 773 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 SERTAD1Q9UHV2 236 aa13.04□□□□□ -0.32
SNCA-202ENST00000345009 PIN4Q9Y237 131 aaKnown RBP13.04□□□□□ -0.32
SNCA-202ENST00000345009 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 ACKR2O00590 384 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 KINO60870 393 aaKnown RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 MAPTP10636 758 aaKnown RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 ATP2A2P16615 1042 aaKnown RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 AFMP43652 599 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 WDR5P61964 334 aaKnown RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 MBTD1Q05BQ5 628 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 MAPK7Q13164 816 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 PRPF4BQ13523 1007 aaKnown RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 LONRF3Q496Y0 759 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 TWF2Q6IBS0 349 aaKnown RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 HACE1Q8IYU2 909 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 BSNDQ8WZ55 320 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 VWCEQ96DN2 955 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 PAGE5Q96GU1 130 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 ADPGKQ9BRR6 497 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 PRO3102Q9H379 93 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 FZD8Q9H461 694 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 MRPL44Q9H9J2 332 aaKnown RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 RGS18Q9NS28 235 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 AGPAT5Q9NUQ2 364 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 LRFN2Q9ULH4 789 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 LTBP2Q14767 1821 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 ARID2Q68CP9 1835 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 LAMA2P24043 3122 aaKnown RBP13.03□□□□□ -0.32
SNCA-202ENST00000345009 SCN5AQ14524 2016 aa13.03□□□□□ -0.32
SNCA-202ENST00000345009 TANC1Q9C0D5 1861 aa13.02□□□□□ -0.32
SNCA-202ENST00000345009 PVALEFA0A1B0GWK0 134 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 DPYSL4O14531 572 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 SLC16A4O15374 487 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 ACTN4O43707 911 aaKnown RBP13.02□□□□□ -0.33
SNCA-202ENST00000345009 PRKCBP05771 671 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 LIG1P18858 919 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 FGFR4P22455 802 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 SARSP49591 514 aaKnown RBP13.02□□□□□ -0.33
SNCA-202ENST00000345009 RAB27AP51159 221 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 ALCAMQ13740 583 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 RASIP1Q5U651 963 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 KRBA2Q6ZNG9 492 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 HAUS6Q7Z4H7 955 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 MYOCDQ8IZQ8 938 aa13.02□□□□□ -0.33
SNCA-202ENST00000345009 STAMQ92783 540 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms