RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 C11orf16Q9NQ32 467 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 LRWD1Q9UFC0 647 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 RAPGEFL1Q9UHV5 662 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 MYH11P35749 1972 aa16.03■□□□□ 0.16
HMGN3-202ENST00000344726 HIDE1A8MVS5 230 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 NT5C1B-RDH14C9J2C7 533 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 H3BQV1 296 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 TSPAN1O60635 241 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 ZNF623O75123 536 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 OFD1O75665 1012 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 CDC25AP30304 524 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 CCT6AP40227 531 aaKnown RBP16.02■□□□□ 0.16
HMGN3-202ENST00000344726 NDUFV1P49821 464 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 MBTD1Q05BQ5 628 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 POU5F1BQ06416 359 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 PDIA5Q14554 519 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 SMAD2Q15796 467 aaKnown RBP16.02■□□□□ 0.16
HMGN3-202ENST00000344726 AMHR2Q16671 573 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 CSPP1Q1MSJ5 1256 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 RILPL1Q5EBL4 403 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 PLPP4Q5VZY2 271 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 LARP1BQ659C4 914 aaKnown RBP16.02■□□□□ 0.16
HMGN3-202ENST00000344726 AGMOQ6ZNB7 445 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 GJD3Q8N144 294 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 BCL7CQ8WUZ0 217 aaPredicted RBP16.02■□□□□ 0.16
HMGN3-202ENST00000344726 TBC1D13Q9NVG8 400 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 LZTS1Q9Y250 596 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.02■□□□□ 0.16
HMGN3-202ENST00000344726 PCDHB2Q9Y5E7 798 aa16.02■□□□□ 0.16
HMGN3-202ENST00000344726 TRIP11Q15643 1979 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 INO80B-WBP1J3KQ70 363 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 MUTP22033 750 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 PRPHP41219 470 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 RAB27AP51159 221 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 BCAR1P56945 870 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 ATP2C1P98194 919 aaPredicted RBP16.01■□□□□ 0.15
HMGN3-202ENST00000344726 KCNC3Q14003 757 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 TFDP1Q14186 410 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 DUSP6Q16828 381 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 HAUS3Q68CZ6 603 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 PADI6Q6TGC4 694 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 MRPL10Q7Z7H8 261 aaKnown RBP16.01■□□□□ 0.15
HMGN3-202ENST00000344726 SMG8Q8ND04 991 aaKnown RBP16.01■□□□□ 0.15
HMGN3-202ENST00000344726 MICAL1Q8TDZ2 1067 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 SNX29Q8TEQ0 813 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 BSNDQ8WZ55 320 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 CPB2Q96IY4 423 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 TCF25Q9BQ70 676 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 MMTAG2Q9BU76 263 aaKnown RBP16.01■□□□□ 0.15
HMGN3-202ENST00000344726 NRDE2Q9H7Z3 1164 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 TLE6Q9H808 572 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 POLD4Q9HCU8 107 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 DNAJB4Q9UDY4 337 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 CD207Q9UJ71 328 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 KIAA1024Q9UPX6 916 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 INPP5FQ9Y2H2 1132 aa16.01■□□□□ 0.15
HMGN3-202ENST00000344726 TRIOO75962 3097 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 ARHGEF35A5YM69 484 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 C19orf67A6NJJ6 358 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 LAD1O00515 517 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 B4GALT5O43286 388 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 ERLIN2O94905 339 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 EYA4O95677 639 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 SKIP12755 728 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 CYP11B2P19099 503 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 PPM1AP35813 382 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 COASYQ13057 564 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 SMAD4Q13485 552 aaKnown RBP16■□□□□ 0.15
HMGN3-202ENST00000344726 ZNF280BQ86YH2 543 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 SMRP1Q8NCR6 262 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 MCPH1Q8NEM0 835 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 VN1R3Q9BXE9 311 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 EIF2AQ9BY44 585 aaKnown RBP16■□□□□ 0.15
HMGN3-202ENST00000344726 MRPL9Q9BYD2 267 aaKnown RBP16■□□□□ 0.15
HMGN3-202ENST00000344726 NFKBIZQ9BYH8 718 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 BHMT2Q9H2M3 363 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 DDX19AQ9NUU7 478 aaKnown RBP16■□□□□ 0.15
HMGN3-202ENST00000344726 SPG21Q9NZD8 308 aa16■□□□□ 0.15
HMGN3-202ENST00000344726 LRRIQ4A6NIV6 560 aa15.99■□□□□ 0.15
HMGN3-202ENST00000344726 ZC3H11AO75152 810 aaKnown RBP eCLIP15.99■□□□□ 0.154e-6■■□□□ 12.4
HMGN3-202ENST00000344726 ARF4P18085 180 aaPredicted RBP15.99■□□□□ 0.15
HMGN3-202ENST00000344726 SSTR3P32745 418 aaPredicted RBP15.99■□□□□ 0.15
HMGN3-202ENST00000344726 NOMO2Q5JPE7 1267 aa15.99■□□□□ 0.15
HMGN3-202ENST00000344726 DTHD1Q6ZMT9 781 aa15.99■□□□□ 0.15
HMGN3-202ENST00000344726 KCNK18Q7Z418 384 aa15.99■□□□□ 0.15
HMGN3-202ENST00000344726 ADHFE1Q8IWW8 467 aa15.99■□□□□ 0.15
HMGN3-202ENST00000344726 PPP2R3CQ969Q6 453 aa15.99■□□□□ 0.15
HMGN3-202ENST00000344726 ENTPD7Q9NQZ7 604 aa15.99■□□□□ 0.15
HMGN3-202ENST00000344726 FAM86C2PA6NEL3 165 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 TTLL13PA6NNM8 815 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 E9PMD0 336 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 PI4K2BG5E9Z4 385 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 DDHD2O94830 711 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 NCLP19338 710 aaKnown RBP15.98■□□□□ 0.15
HMGN3-202ENST00000344726 COL9A1P20849 921 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 AXLP30530 894 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 SLC11A1P49279 550 aa15.98■□□□□ 0.15
HMGN3-202ENST00000344726 PCBP1Q15365 356 aaKnown RBP eCLIP15.98■□□□□ 0.15
HMGN3-202ENST00000344726 CDCA2Q69YH5 1023 aaPredicted RBP15.98■□□□□ 0.15
HMGN3-202ENST00000344726 NOTUMQ6P988 496 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms