RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 ARF4P18085 180 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ME1P48163 572 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PEX3P56589 373 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 MCM6Q14566 821 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 UBXN11Q5T124 520 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SHC4Q6S5L8 630 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SV2BQ7L1I2 683 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 GPBP1Q86WP2 473 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SLC17A8Q8NDX2 589 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 FAM161BQ96MY7 647 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PLVAPQ9BX97 442 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 UBN1Q9NPG3 1134 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 KMT5AQ9NQR1 393 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CIZ1Q9ULV3 898 aaPredicted RBP14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PCDHB2Q9Y5E7 798 aa14.43□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ZMYM2Q9UBW7 1377 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CARNS1A5YM72 827 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 NCLP19338 710 aaKnown RBP14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 BMPR1AP36894 532 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 STAT6P42226 847 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 GIT2Q14161 759 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 E2F4Q16254 413 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 FOXD4L6Q3SYB3 417 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 RESP18Q5W5W9 173 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ADALQ6DHV7 355 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SLC27A1Q6PCB7 646 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 FOXD4L3Q6VB84 417 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 LEO1Q8WVC0 666 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CASD1Q96PB1 797 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 GAS2L1Q99501 681 aaPredicted RBP14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 REEP2Q9BRK0 252 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 MRPL9Q9BYD2 267 aaKnown RBP14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 LRRC27Q9C0I9 530 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 MAGEF1Q9HAY2 307 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PARVGQ9HBI0 331 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 RNF19AQ9NV58 838 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 LMCD1Q9NZU5 365 aa14.42□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CCDC169A6NNP5 214 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 K7ERI5 159 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 INPPL1O15357 1258 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PRKCBP05771 671 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PRPF4BQ13523 1007 aaKnown RBP14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 EPC2Q52LR7 807 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 TMEM192Q8IY95 271 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 HACE1Q8IYU2 909 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ABI1Q8IZP0 508 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 IQUBQ8NA54 791 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 TMEM161BQ8NDZ6 487 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 P2RX5Q93086 422 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SPATA32Q96LK8 384 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 PRDM12Q9H4Q4 367 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 FAM13BQ9NYF5 915 aa14.41□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CHD7Q9P2D1 2997 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 A0A087X0B3 334 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 N4BP3O15049 544 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 B4GALT5O43286 388 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 FGFR1P11362 822 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CMA1P23946 247 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ANP32AP39687 249 aaKnown RBP14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 NCKAP1LP55160 1127 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CSPP1Q1MSJ5 1256 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CLLU1OSQ5K130 101 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 CNNM4Q6P4Q7 775 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 GLB1LQ6UWU2 654 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 APBB1IPQ7Z5R6 666 aaPredicted RBP14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 LRRC43Q8N309 656 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 FBXO22Q8NEZ5 403 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 ARNTL2Q8WYA1 636 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 C17orf80Q9BSJ5 609 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 TNMDQ9H2S6 317 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 POLD4Q9HCU8 107 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 KBTBD4Q9NVX7 518 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 SEL1LQ9UBV2 794 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 IPPQ9Y573 584 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 MRPL42Q9Y6G3 142 aaKnown RBP14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 MYH15Q9Y2K3 1946 aa14.4□□□□□ -0.1
HLA-DQA1-201ENST00000343139 NPHP3-ACAD11A0A0J9YXS1 232 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TBKBP1A7MCY6 615 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 SFI1A8K8P3 1242 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 H3BNC9 293 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TBCAO75347 108 aaKnown RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 FAM13AO94988 1023 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 KRT18P05783 430 aaKnown RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MAPTP10636 758 aaKnown RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 FOSL2P15408 326 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 AMPD3Q01432 767 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 RAD51AP2Q09MP3 1159 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 SMG8Q8ND04 991 aaKnown RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 MYLIPQ8WY64 445 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 DDX12PQ92771 950 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 CPB2Q96IY4 423 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ADPGKQ9BRR6 497 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 C11orf84Q9BUA3 381 aaPredicted RBP14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 KIFC3Q9BVG8 833 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 ST6GALNAC4Q9H4F1 302 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 AAASQ9NRG9 546 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 KANSL3Q9P2N6 904 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 TNFSF13BQ9Y275 285 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 GIT1Q9Y2X7 761 aa14.39□□□□□ -0.11
HLA-DQA1-201ENST00000343139 FAM237AA0A1B0GTK4 181 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms