RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 NCF2P19878 526 aaPredicted RBP15.84■□□□□ 0.13
RRP1B-201ENST00000340648 FMO5P49326 533 aa15.84■□□□□ 0.13
RRP1B-201ENST00000340648 PDIA2Q13087 525 aaKnown RBP15.84■□□□□ 0.13
RRP1B-201ENST00000340648 AENQ8WTP8 325 aaKnown RBP15.84■□□□□ 0.13
RRP1B-201ENST00000340648 GRAMD1AQ96CP6 724 aa15.84■□□□□ 0.13
RRP1B-201ENST00000340648 TTC25Q96NG3 672 aa15.84■□□□□ 0.13
RRP1B-201ENST00000340648 SUCLA2Q9P2R7 463 aaPredicted RBP15.84■□□□□ 0.13
RRP1B-201ENST00000340648 MAD2L2Q9UI95 211 aa15.84■□□□□ 0.13
RRP1B-201ENST00000340648 GJA3Q9Y6H8 435 aa15.84■□□□□ 0.13
RRP1B-201ENST00000340648 IGF2BP3O00425 579 aaKnown RBP eCLIP15.83■□□□□ 0.136e-7■■■□□ 17.1
RRP1B-201ENST00000340648 SLC16A3O15427 465 aaKnown RBP15.83■□□□□ 0.13
RRP1B-201ENST00000340648 SYF2O95926 243 aaKnown RBP15.83■□□□□ 0.13
RRP1B-201ENST00000340648 FAM153BP0C7A2 387 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 SCTRP47872 440 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 ERFP50548 548 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 DBN1Q16643 649 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 FAM153CQ494X1 144 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 MTERF2Q49AM1 385 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 NME8Q8N427 588 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 MORC4Q8TE76 937 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 RBM41Q96IZ5 413 aaKnown RBP15.83■□□□□ 0.13
RRP1B-201ENST00000340648 ALG13Q9NP73 1137 aaKnown RBP15.83■□□□□ 0.13
RRP1B-201ENST00000340648 FAM153AQ9UHL3 310 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 NAGPAQ9UK23 515 aa15.83■□□□□ 0.13
RRP1B-201ENST00000340648 DIP2BQ9P265 1576 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 PABPN1LA6NDY0 278 aaKnown RBP15.83■□□□□ 0.12
RRP1B-201ENST00000340648 IPO5O00410 1097 aaKnown RBP15.83■□□□□ 0.12
RRP1B-201ENST00000340648 KITP10721 976 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 RASA1P20936 1047 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 ARFIP2P53365 341 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.83■□□□□ 0.12
RRP1B-201ENST00000340648 BARGINQ6ZT62 677 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 DNAAF5Q86Y56 855 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 SMYD2Q9NRG4 433 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 SYNJ2BP-COX16A0A087WUM0 186 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 SLC37A4O43826 429 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 ANXA13P27216 316 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 PLCB4Q15147 1175 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 HSP90AA5PQ58FG0 334 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 DDX27Q96GQ7 796 aaKnown RBP15.83■□□□□ 0.12
RRP1B-201ENST00000340648 COX16Q9P0S2 106 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 SPECC1L-ADORA2AF8WAN1 911 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 EYA4O95677 639 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 GARSP41250 739 aaKnown RBP15.83■□□□□ 0.12
RRP1B-201ENST00000340648 ATG16L1Q676U5 607 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 TMEM179Q6ZVK1 233 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 TSEN2Q8NCE0 465 aaKnown RBP15.83■□□□□ 0.12
RRP1B-201ENST00000340648 SLC7A3Q8WY07 619 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 FAM161BQ96MY7 647 aa15.83■□□□□ 0.12
RRP1B-201ENST00000340648 FAM237AA0A1B0GTK4 181 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 RTN2O75298 545 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 ABL1P00519 1130 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 FXR2P51116 673 aaKnown RBP eCLIP15.82■□□□□ 0.122e-6■■■■□ 20.5
RRP1B-201ENST00000340648 TMEM270Q6UE05 265 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 SMIM5Q71RC9 77 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 ZBTB33Q86T24 672 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 ST13P4Q8IZP2 240 aaPredicted RBP15.82■□□□□ 0.12
RRP1B-201ENST00000340648 SLC30A5Q8TAD4 765 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 SEL1LQ9UBV2 794 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 PDE2AO00408 941 aaPredicted RBP15.82■□□□□ 0.12
RRP1B-201ENST00000340648 ATMINO43313 823 aaPredicted RBP15.82■□□□□ 0.12
RRP1B-201ENST00000340648 PSMA2P25787 234 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 SSTR3P32745 418 aaPredicted RBP15.82■□□□□ 0.12
RRP1B-201ENST00000340648 LRRC23Q53EV4 343 aaPredicted RBP15.82■□□□□ 0.12
RRP1B-201ENST00000340648 PPP1R2P3Q6NXS1 205 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 TRMT10CQ7L0Y3 403 aaKnown RBP15.82■□□□□ 0.12
RRP1B-201ENST00000340648 PIP4K2CQ8TBX8 421 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 HSPH1Q92598 858 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 ERP27Q96DN0 273 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 SMYD3Q9H7B4 428 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 HESX1Q9UBX0 185 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 ALG6Q9Y672 507 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 PITPNM2Q9BZ72 1349 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 TCRBV5S4A2TA0A5A2 114 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 A6NJR5 290 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 LXNQ9BS40 222 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 MTMR4Q9NYA4 1195 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 ABCB11O95342 1321 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 TMEM253P0C7T8 217 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 PDHBP11177 359 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 RFX1P22670 979 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 KYNUQ16719 465 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 ERICH1Q86X53 443 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 CRLF3Q8IUI8 442 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 TTC1Q99614 292 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 FAM213AQ9BRX8 229 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 TRABDQ9H4I3 376 aa15.82■□□□□ 0.12
RRP1B-201ENST00000340648 TMEM131LA2VDJ0 1609 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 CCDC195A0A1B0GUA6 201 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 C1orf146Q5VVC0 180 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 ADGRA1Q86SQ6 560 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 NSMCE1Q8WV22 266 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 CENPKQ9BS16 269 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 COMTP21964 271 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 STAT4Q14765 748 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 MMEL1Q495T6 779 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 ZC2HC1CQ53FD0 456 aaPredicted RBP15.81■□□□□ 0.12
RRP1B-201ENST00000340648 CREG2Q8IUH2 290 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 C4orf33Q8N1A6 199 aa15.81■□□□□ 0.12
RRP1B-201ENST00000340648 BATF3Q9NR55 127 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms